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View Structure Prediction Details

Protein: gi|167773923
Organism: synthetic construct
Length: 141 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|167773923.

Description E-value Query
Range		 Subject
Range
gi|114577766 - gi|114577766|ref|XP_001167206.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
 187.0 [0..1] [141..54]
gi|89031517 - gi|89031517|ref|XP_931120.1| PREDICTED: similar to hCG1791993 [Homo sapiens]
 178.0 [0..1] [141..1]
C1D_BOVIN - Nuclear nucleic acid-binding protein C1D OS=Bos taurus GN=C1D PE=2 SV=1
 178.0 [0..1] [140..1]
gi|109103210 - gi|109103210|ref|XP_001093680.1| PREDICTED: similar to nuclear DNA-binding protein [Macaca mulatta]
 177.0 [0..1] [141..1]
gi|73970225 - gi|73970225|ref|XP_855373.1| PREDICTED: similar to nuclear DNA-binding protein [Canis familiaris]
 175.0 [0..1] [140..15]

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Predicted Domain #1
Region A:
Residues: [1-141] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGEEINEDY PVEIHEYLSA FENSIGAVDE MLKTMMSVSR NELLQKLDPL EQAKVDLVSA  60
   61 YTLNSMFWVY LATQGVNPKE HPVKQELERI RVYMNRVKEI TDKKKAGKLD RGAASRFVKN 120
  121 ALWEPKSKNA SKVANKGKSK S

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 24.387216
Match: PF04000.6
Description: No description for PF04000.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle