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View Structure Prediction Details

Protein: gi|221314627
Organism: Bacillus subtilis subsp. subtilis str. NCIB 3610
Length: 307 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|221314627.

Description E-value Query
Range
Subject
Range
gi|93279549 - gi|93279549|pdb|2FK6|A Chain A, Crystal Structure Of Rnase ZTRNA(THR) COMPLEX
274.0 [0..1] [307..1]

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Predicted Domain #1
Region A:
Residues: [1-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELLFLGTGA GIPAKARNVT SVALKLLEER RSVWLFDCGE ATQHQILHTT IKPRKIEKIF  60
   61 ITHMHGDHVY GLPGLLGSRS FQGGEDELTV YGPKGIKAFI ETSLAVTKTH LTYPLAIQEI 120
  121 EEGIVFEDDQ FIVTAVSVIH GVEAFGYRVQ EKDVPGSLKA DVLKEMNIPP GPVYQKIKKG 180
  181 ETVTLEDGRI INGNDFLEPP KKGRSVVFSG DTRVSDKLKE LARDCDVLVH EATFAKEDRK 240
  241 LAYDYYHSTT EQAAVTAKEA RAKQLILTHI SARYQGDASL ELQKEAVDVF PNSVAAYDFL 300
  301 EVNVPRG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.522879
Match: 1y44A
Description: Crystal structure of RNase Z
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.941400907161877 bayes_pls_golite062009
ribonuclease activity 0.821932590977239 bayes_pls_golite062009
hydrolase activity 0.742182118492248 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.436897326207341 bayes_pls_golite062009
endoribonuclease activity 0.364180397113473 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle