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View Structure Prediction Details

Protein: gi|167893277
Organism: Burkholderia pseudomallei 7894
Length: 128 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|167893277.

Description E-value Query
Range
Subject
Range
PAND_BURL3 - Aspartate 1-decarboxylase OS=Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194 ...
PAND_BURS3 - Aspartate 1-decarboxylase OS=Burkholderia sp. (strain 383) GN=panD PE=3 SV=1
229.0 [0..1] [128..1]

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Predicted Domain #1
Region A:
Residues: [1-128]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRHMLKSKI HRAAVTHCEL HYEGSCAIDE DLLEAANIVE NERIDIWNVN NGERFSTYAI  60
   61 KGERGSGMIS LNGSAARRAQ LGDLVIIAAF AMIDEQELKA GWKPDLVFVD EDNKIKGSRD 120
  121 HVPTQNWT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.045757
Match: 1ppyA
Description: Native precursor of pyruvoyl dependent Aspartate decarboxylase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
aspartate 1-decarboxylase activity 5.28630608185839 bayes_pls_golite062009
carboxy-lyase activity 1.90738294399091 bayes_pls_golite062009
catalytic activity 1.55034677075026 bayes_pls_golite062009
carbon-carbon lyase activity 1.31402947495071 bayes_pls_golite062009
lyase activity 0.300409233756216 bayes_pls_golite062009

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