YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|209398880, gi...
Organism:	Escherichia coli O157:H7 str. EC4115
Length:	186 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|209398880, gi....

Description	E-value	Query Range	Subject Range
YP20_BACLI - Uncharacterized N-acetyltransferase p20 OS=Bacillus licheniformis GN=p20 PE=3 SV=1	157.0	[0..2]	[171..4]
gi\|52784100, gi\|... - gi\|52784100\|ref\|YP_089929.1\| YnaD [Bacillus licheniformis ATCC 14580], gi\|52346602\|gb\|AAU39236.1\| Yn...	156.0	[0..2]	[171..4]
gi\|167040456, gi... - gi\|167040456\|ref\|YP_001663441.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter sp. X514], gi\|... gi\|255339225, gi... - gi\|255339225\|ref\|ZP_05380065.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter mathranii subsp... gi\|242256373, gi... - gi\|242256373\|ref\|ZP_04801265.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter sp. X513], gi\|2...	155.0	[0..2]	[170..9]
gi\|116108080, gi... - gi\|116512426\|ref\|YP_809642.1\| spermidine acetyltransferase [Lactococcus lactis subsp. cremoris SK11]...	153.0	[0..6]	[177..9]
gi\|91072368, gi\|... - gi\|91210794\|ref\|YP_540780.1\| spermidine N(1)-acetyltransferase [Escherichia coli UTI89], gi\|91072368... gi\|218365223, gi... - gi\|218558454\|ref\|YP_002391367.1\| spermidine N1-acetyltransferase [Escherichia coli S88], gi\|21836522... gi\|110641710, gi... - gi\|110641710\|ref\|YP_669440.1\| spermidine N(1)-acetyltransferase [Escherichia coli 536], gi\|110343302... gi\|218689505, gi... - gi\|218689505\|ref\|YP_002397717.1\| spermidine N1-acetyltransferase [Escherichia coli ED1a], gi\|2184270... gi\|218351878, gi... - gi\|218695146\|ref\|YP_002402813.1\| spermidine N1-acetyltransferase [Escherichia coli 55989], gi\|218351... gi\|218369836, gi... - gi\|218699850\|ref\|YP_002407479.1\| spermidine N1-acetyltransferase [Escherichia coli IAI39], gi\|218369... gi\|218432180, gi... - gi\|218705083\|ref\|YP_002412602.1\| spermidine N1-acetyltransferase [Escherichia coli UMN026], gi\|21843... gi\|117623770, gi... - gi\|117623770\|ref\|YP_852683.1\| spermidine N1-acetyltransferase [Escherichia coli APEC O1], gi\|1155128... gi\|237705523, gi... - gi\|237705523\|ref\|ZP_04536004.1\| spermidine N1-acetyltransferase [Escherichia sp. 3_2_53FAA], gi\|2269... gi\|227836988, gi... - gi\|227886059\|ref\|ZP_04003864.1\| spermidine N(1)-acetyltransferase [Escherichia coli 83972], gi\|22783... gi\|170682991, gi... - gi\|170682991\|ref\|YP_001743670.1\| diamine N-acetyltransferase [Escherichia coli SMS-3-5], gi\|17052070... gi\|215486759, gi... - gi\|215486759\|ref\|YP_002329190.1\| spermidine N1-acetyltransferase [Escherichia coli O127:H6 str. E234... gi\|191174333, gi... - gi\|75236701\|ref\|ZP_00720780.1\| COG1670: Acetyltransferases, including N-acetylases of ribosomal prot... gi\|26247829, gi\|... - gi\|26247829\|ref\|NP_753869.1\| spermidine N(1)-acetyltransferase [Escherichia coli CFT073], gi\|2610823...	153.0	[0..1]	[186..1]
gi\|20516549, gi\|... - gi\|20807976\|ref\|NP_623147.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20516549\|g... gi\|20807976 - gi\|20807976\|ref\|NP_623147.1\| Acetyltransferase, including N-acetylase of ribosomal proteins [Thermoa...	153.0	[0..2]	[175..7]
gi\|25303645 - pir\|\|G86826 diamine N-acetyltransferase (EC 2.3.1.57) [imported] - Lactococcus lactis subsp. lactis ... gi\|12724622, gi\|... - gi\|15673597\|ref\|NP_267771.1\| spermidine acetyltransferase [Lactococcus lactis subsp. lactis Il1403],...	152.0	[0..1]	[175..4]
gi\|194469511, gi... - gi\|194469511\|ref\|ZP_03075495.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica ser... gi\|194735266, gi... - gi\|194735266\|ref\|YP_002114518.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica se... gi\|194403995, gi... - gi\|194445332\|ref\|YP_002040751.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica se... gi\|194409541, gi... - gi\|194451237\|ref\|YP_002045540.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica se... gi\|195634264, gi... - gi\|195634264\|gb\|EDX52616.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica serovar... lcl\|NC_016856.1_... - [gene=speG] [protein=spermidine N1-acetyltransferase] [protein_id=YP_005237383.1] [location=compleme... gi\|168819262, gi... - gi\|205343770\|gb\|EDZ30534.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica serovar... gi\|205339611, gi... - gi\|205339611\|gb\|EDZ26375.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica serovar... gi\|205350843, gi... - gi\|205350843\|gb\|EDZ37474.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica serovar... gi\|16764847, gi\|... - gi\|16764847\|ref\|NP_460462.1\| spermidine N1-acetyltransferase [Salmonella typhimurium LT2], gi\|164200... gi\|205335445, gi... - gi\|205335445\|gb\|EDZ22209.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica serovar... gi\|197290945, gi... - gi\|197290945\|gb\|EDY30298.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica serovar... gi\|205324897, gi... - gi\|205324897\|gb\|EDZ12736.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica serovar... gi\|205327688, gi... - gi\|205327688\|gb\|EDZ14452.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica serovar... gi\|161614070, gi... - gi\|161614070\|ref\|YP_001588035.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enteric... gi\|224468518, gi... - gi\|224583991\|ref\|YP_002637789.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enteric... gi\|205272575, gi... - gi\|205352794\|ref\|YP_002226595.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enteric... gi\|207856997, gi... - gi\|207856997\|ref\|YP_002243648.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enteric... gi\|200389540, gi... - gi\|200389540\|ref\|ZP_03216151.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica ser... gi\|204323178, gi... - gi\|204927836\|ref\|ZP_03219037.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica ser... gi\|197362460, gi... - gi\|197362460\|ref\|YP_002142097.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enteric... gi\|197939564, gi... - gi\|198245048\|ref\|YP_002215635.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica se... gi\|197214157, gi... - gi\|197250454\|ref\|YP_002146541.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica se... gi\|197242842, gi... - gi\|197264587\|ref\|ZP_03164661.1\| diamine N-acetyltransferase [Salmonella enterica subsp. enterica ser... gi\|238911734 - gi\|238911734\|ref\|ZP_04655571.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enterica... gi\|56413535, gi\|... - gi\|56413535\|ref\|YP_150610.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enterica se... gi\|62180089, gi\|... - gi\|62180089\|ref\|YP_216506.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enterica se...	151.0	[0..1]	[186..1]
gi\|83570955, gi\|... - gi\|83570955\|ref\|ZP_00922397.1\| COG1670: Acetyltransferases, including N-acetylases of ribosomal prot...	151.0	[0..1]	[186..1]
gi\|213864965 - gi\|213864965\|ref\|ZP_03387084.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enterica... gi\|214002568 - gi\|214002568\|ref\|ZP_03413303.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enterica... gi\|213428605 - gi\|213428605\|ref\|ZP_03361355.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enterica... gi\|213580897 - gi\|213580897\|ref\|ZP_03362723.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enterica... gi\|213610037 - gi\|213610037\|ref\|ZP_03369863.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enterica... gi\|213650648 - gi\|213650648\|ref\|ZP_03380701.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enterica... gi\|213024287 - gi\|213024287\|ref\|ZP_03338734.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enterica... gi\|213053242 - gi\|213053242\|ref\|ZP_03346120.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enterica... gi\|29141875, gi\|... - gi\|29141875\|ref\|NP_805217.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enterica se... gi\|16760361 - gi\|16760361\|ref\|NP_455978.1\| spermidine N1-acetyltransferase [Salmonella enterica subsp. enterica se... gi\|16502656, gi\|... - gi\|25303636\|pir\|\|AB0680 spermidine N1-acetyltransferase [imported] - Salmonella enterica subsp. ente...	151.0	[0..1]	[186..1]

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Predicted Domain #1

Region A:
Residues: [1-186]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSAHSVKLR PLEREDLRYV HQLDNNASVM RYWFEEPYEA FVELSDLYDK HIHDQSERRF  60
   61 VVECDGEKAG LVELVEINHV HRRAEFQIII SPEYQGKGLA TRAAKLAMDY GFTVLNLYKL 120
  121 YLIVDKENEK AIHIYRKLGF SVEGELMHEF FINGQYRNAI RMCIFQHQYL AEHKTPGQTL 180
  181 LKPTAQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	29.0
Match:	1nslA
Description:	Probable acetyltransferase YdaF
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.34977492703662	bayes_pls_golite062009
transferase activity	1.92514630957121	bayes_pls_golite062009
N-acyltransferase activity	1.84700347747217	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.75772333794819	bayes_pls_golite062009
diamine N-acetyltransferase activity	1.70366130289739	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.63399963366073	bayes_pls_golite062009
acyltransferase activity	1.60091210227059	bayes_pls_golite062009
acetyltransferase activity	1.12147423121182	bayes_pls_golite062009
N-acetyltransferase activity	0.796917859235554	bayes_pls_golite062009
ornithine decarboxylase regulator activity	0.242898256634811	bayes_pls_golite062009
ornithine decarboxylase inhibitor activity	0.212532359888719	bayes_pls_golite062009
arginine N-succinyltransferase activity	0.141144689590571	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: