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View Structure Prediction Details

Protein: ths-PA
Organism: Drosophila melanogaster
Length: 748 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ths-PA.

Description E-value Query
Range
Subject
Range
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
276.0 [0..103] [747..976]

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Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNQLERLLF FIVVISGALC TVEDYVIMSQ CAHNKAIHIA AEGTVSVTDT SQIQNITIVG  60
   61 FPDYLNNEFK IALYAKETRR YLCFNDNWRL VGMRELRDTC YFNETIVHGY FVFRSVVDLQ 120
  121 RRVGFTHRGK PVGPKKSVND ACYMFNKIEA EQFFRHHHNN GNSGNNNGNG SGNDNGNGSN 180
  181 NSRKPPRNNK NNRHKSNNQN QKLQQQQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.25
Match: 2p23A
Description: No description for 2p23A was found.

Predicted Domain #2
Region A:
Residues: [208-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EHHGHNNNNN NVILNNSNTS LSSTNKKQLA INRQRQQQQQ HQVRHHHNDP SLLLRRQQHE  60
   61 KKQKRRKQQK QQQHQQRVSA SPTNPMPATP TAAPAATPTV AATSPATATR STTAAMSSKR 120
  121 KGRRRKAKVR PKAQQQQQLQ LLATAATSPY TDDTLYGSSS SSSSTGFEDL DIYNSSSSSG 180
  181 SSSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [392-498]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDPWSTWSTI DSFSGSSTTA TSDDSISSSS SSNYDAWATY ITEMEAEASA MTPEMGGNDT  60
   61 ELMQYEAELV DDPEAESTAT IETKATSVTS TIAATAATTT STAGSQL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [499-653]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VIEQTPLARS NISNKSSSST KATPTATSQT ETAQSTQQPS RHRSNSREDH LDNSDMLLAG  60
   61 ENEVKPQQPR KLLWTVQPPL ATRGSTLATL VATPEQQHTS TTATAATTPE QHVAPSLFSV 120
  121 DKNINSNLNN TLTEASPTAT STSSITSATT MKRPI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [654-748]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKFTKKLMAT PYHQLTYVRN AGGDIDIDNL DNISVYPVLY DGDLEGNGGG NSSDGGFSGF  60
   61 LPTSTTSHLT EPIRIGMNRI RPNKTLHWFT HQRFA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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