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View Structure Prediction Details

Protein: gi|167721129
Organism: Burkholderia pseudomallei DM98
Length: 162 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|167721129.

Description E-value Query
Range
Subject
Range
gi|171992222, gi... - gi|172059705|ref|YP_001807357.1| Ferritin Dps family protein [Burkholderia ambifaria MC40-6], gi|171...
gi|115350672, gi... - gi|74017104|ref|ZP_00687729.1| Ferritin and Dps [Burkholderia ambifaria AMMD], gi|72610575|gb|EAO465...
172.0 [0..1] [162..1]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKSNATQI NIGISDKDRK KIAAGLSRLL ADTYTLYLKT HNFHWNVTGP MFNTLHLMFE  60
   61 EQYNELWLAV DLVAERIRTL GVVAPGTYRE FAKLSSIPEA DGVPAAEEMI RQLVEGHEAV 120
  121 VRTARAIFPD ADAASDEPTA DLLTQRLQTH EKTAWMLRSL LA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.0
Match: 1jigA
Description: Dodecameric ferritin homolog
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ferric iron binding 5.04257467619625 bayes_pls_golite062009
iron ion binding 2.78901512903296 bayes_pls_golite062009
transition metal ion binding 1.16341417841209 bayes_pls_golite062009
cation binding 1.04351481105022 bayes_pls_golite062009
metal ion binding 1.04351481105022 bayes_pls_golite062009
ion binding 1.03468252536661 bayes_pls_golite062009
binding 0.849367448640789 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle