YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|167636457, gi...
Organism:	Bacillus anthracis str. A0442
Length:	191 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|167636457, gi....

Description	E-value	Query Range	Subject Range
gi\|51975396, gi\|... - gi\|52141927\|ref\|YP_084902.1\| AhpC/TSA family protein [Bacillus cereus E33L], gi\|51975396\|gb\|AAU16946...	6.0E-48	[1..191]	[1..191]
gi\|42782682, gi\|... - gi\|42782682\|ref\|NP_979929.1\| ahpC/TSA family protein [Bacillus cereus ATCC 10987], gi\|42738608\|gb\|AA...	7.0E-48	[1..191]	[1..191]
gi\|47555373, gi\|... - gi\|47567895\|ref\|ZP_00238602.1\| thioredoxin family protein [Bacillus cereus G9241], gi\|47555373\|gb\|EA...	7.0E-48	[1..191]	[1..191]
gi\|228793228, gi... - gi\|228966506\|ref\|ZP_04127559.1\| AhpC/TSA [Bacillus thuringiensis serovar sotto str. T04001], gi\|2287... gi\|75760701, gi\|... - gi\|75760701\|ref\|ZP_00740726.1\| Thiol:disulfide interchange protein tlpA [Bacillus thuringiensis sero... gi\|228902110, gi... - gi\|228902110\|ref\|ZP_04066274.1\| AhpC/TSA [Bacillus thuringiensis IBL 4222], gi\|228857536\|gb\|EEN02032...	1.0E-47	[1..191]	[1..191]
gi\|30021713, gi\|... - gi\|30021713\|ref\|NP_833344.1\| Thiol:disulfide interchange protein tlpA [Bacillus cereus ATCC 14579], ...	4.0E-46	[1..191]	[1..191]
gi\|89208416, gi\|... - gi\|89208416\|ref\|ZP_01186924.1\| thiol:disulfide interchange protein tlpA [Bacillus weihenstephanensis...	1.0E-44	[1..191]	[1..191]
gi\|89203351, gi\|... - gi\|89203351\|ref\|ZP_01182026.1\| AhpC/TSA family protein [Bacillus cereus subsp. cytotoxis NVH 391-98]...	6.0E-41	[1..191]	[1..191]
gi\|56420614, gi\|... - gi\|56420614\|ref\|YP_147932.1\| thiol:disulfide interchange protein (thioredoxin) [Geobacillus kaustoph...	4.0E-37	[11..191]	[2..179]
gi\|89158835, gi\|... - gi\|89211558\|ref\|ZP_01189917.1\| thiol:disulfide interchange protein (thioredoxin) [Halothermothrix or...	4.0E-36	[1..188]	[1..171]
gi\|219668315, gi... - gi\|219668315\|ref\|YP_002458750.1\| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal alle... gi\|89893941, gi\|... - gi\|89893941\|ref\|YP_517428.1\| hypothetical protein DSY1195 [Desulfitobacterium hafniense Y51], gi\|893...	5.0E-36	[2..188]	[4..194]

Back

Predicted Domain #1

Region A:
Residues: [1-191]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRKLTIIVV LLCLAGYAAY EQFGKSDQAA QGEQEKSEAA MKEMIASNGI EIGKSAPDFE  60
   61 LTKLDGTNIK LSDLKGKKVI LNFWATWCGP CQQEMPDMEA FYKKHKDNVE ILAINYTPSE 120
  121 KGGGVEKVSN FAKEKGITFP ILLDKNIDVT TAYKVITIPT SYFIDTKGVI QDKFIGPMTQ 180
  181 KEMEKRIAKL K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	30.69897
Match:	2f9sA
Description:	No description for 2f9sA was found.

Predicted functions:

Term	Confidence	Notes
oxidoreductase activity, acting on sulfur group of donors	2.86692719437628	bayes_pls_golite062009
protein-disulfide reductase activity	1.83719069508346	bayes_pls_golite062009
protein disulfide isomerase activity	1.48801287843472	bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing S-S bonds	1.48801287843472	bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting keto- and enol-groups	1.37876060576659	bayes_pls_golite062009
catalytic activity	1.04263226837398	bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor	0.69144636750113	bayes_pls_golite062009
isomerase activity	0.24662332270942	bayes_pls_golite062009
disulfide oxidoreductase activity	0.22354310938224	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: