YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|34810976
Organism:	Haemophilus influenzae
Length:	306 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34810976.

Description	E-value	Query Range	Subject Range
MURQ_THEPX - N-acetylmuramic acid 6-phosphate etherase OS=Thermoanaerobacter sp. (strain X514) GN=murQ PE=3 SV=1 gi\|242231194, gi... - gi\|242257306\|ref\|ZP_04802176.1\| glucokinase regulatory-like protein [Thermoanaerobacter sp. X513], g...	254.0	[0..11]	[304..2]
MURQ_HAEIN - N-acetylmuramic acid 6-phosphate etherase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 /... MURQ_HAEIN, Y754... - (P44862) Protein HI0754, N-acetylmuramic acid 6-phosphate etherase OS=Haemophilus influenzae GN=murQ...	253.0	[0..4]	[306..1]
MURQ_PHOLL - N-acetylmuramic acid 6-phosphate etherase OS=Photorhabdus luminescens subsp. laumondii GN=murQ PE=2 ... MURQ_PHOLL - N-acetylmuramic acid 6-phosphate etherase OS=Photorhabdus luminescens subsp. laumondii (strain DSM 1...	252.0	[0..8]	[305..1]
gi\|116184416, gi... - gi\|75854865\|ref\|ZP_00762535.1\| COG2103: Predicted sugar phosphate isomerase [Vibrio sp. Ex25], gi\|25...	250.0	[0..5]	[304..3]
gi\|75818318, gi\|... - gi\|75818318\|ref\|ZP_00748498.1\| COG2103: Predicted sugar phosphate isomerase [Vibrio cholerae V51], g...	249.0	[0..5]	[306..3]
gi\|77978401, gi\|... - gi\|77978401\|ref\|ZP_00833830.1\| COG2103: Predicted sugar phosphate isomerase [Yersinia intermedia ATC...	249.0	[0..11]	[304..2]
gi\|194534984, gi... - gi\|75824092\|ref\|ZP_00753559.1\| COG2103: Predicted sugar phosphate isomerase [Vibrio cholerae RC385],... tr\|D7HD71\|D7HD71... - N-acetylmuramic acid 6-phosphate etherase OS=Vibrio cholerae RC385 GN=murQ PE=3 SV=1	249.0	[0..5]	[306..3]
gi\|227008759, gi... - gi\|227080871\|ref\|YP_002809422.1\| glucokinase regulatory protein-related protein [Vibrio cholerae M66... MURQ2_VIBCH - N-acetylmuramic acid 6-phosphate etherase 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El T... gi\|229505690, gi... - gi\|229505690\|ref\|ZP_04395200.1\| N-acetylmuramic acid 6-phosphate etherase [Vibrio cholerae BX 330286... gi\|229350570, gi... - gi\|229512420\|ref\|ZP_04401894.1\| N-acetylmuramic acid 6-phosphate etherase [Vibrio cholerae TMA 21], ... gi\|229344203, gi... - gi\|229519514\|ref\|ZP_04408957.1\| N-acetylmuramic acid 6-phosphate etherase [Vibrio cholerae RC9], gi\|... gi\|229343014, gi... - gi\|229519962\|ref\|ZP_04409392.1\| N-acetylmuramic acid 6-phosphate etherase [Vibrio cholerae TM 11079-... gi\|229338922, gi... - gi\|229525341\|ref\|ZP_04414746.1\| N-acetylmuramic acid 6-phosphate etherase [Vibrio cholerae bv. alben... gi\|229608709, gi... - gi\|229608709\|ref\|YP_002879357.1\| N-acetylmuramic acid 6-phosphate etherase [Vibrio cholerae MJ-1236]... gi\|75829543, gi\|... - gi\|75829543\|ref\|ZP_00758842.1\| COG2103: Predicted sugar phosphate isomerase [Vibrio cholerae MO10], ... gi\|75815395, gi\|... - gi\|75815395\|ref\|ZP_00745906.1\| COG2103: Predicted sugar phosphate isomerase [Vibrio cholerae V52], g... gi\|146317563, gi... - gi\|75826049\|ref\|ZP_00755484.1\| COG2103: Predicted sugar phosphate isomerase [Vibrio cholerae O395], ... Y690_VIBCH, MURQ... - (Q9KU39) Protein VC0690, N-acetylmuramic acid 6-phosphate etherase 2 OS=Vibrio cholerae GN=murQ2 PE=... gi\|121587766, gi... - gi\|121587766\|ref\|ZP_01677526.1\| glucokinase regulator-related protein [Vibrio cholerae 2740-80], gi\|... gi\|124114924, gi... - gi\|153215133\|ref\|ZP_01949840.1\| glucokinase regulator-related protein [Vibrio cholerae 1587], gi\|124... gi\|254291967, gi... - gi\|254291967\|ref\|ZP_04962747.1\| glucokinase regulator-related protein [Vibrio cholerae AM-19226], gi... gi\|153818722, gi... - gi\|153818722\|ref\|ZP_01971389.1\| glucokinase regulator-related protein [Vibrio cholerae NCTC 8457], g... gi\|153829354, gi... - gi\|153829354\|ref\|ZP_01982021.1\| glucokinase regulator-related protein [Vibrio cholerae 623-39], gi\|1... gi\|153822757, gi... - gi\|229508736\|ref\|ZP_04398229.1\| N-acetylmuramic acid 6-phosphate etherase [Vibrio cholerae B33], gi\|... gi\|153826768, gi... - gi\|153826768\|ref\|ZP_01979435.1\| glucokinase regulator-related protein [Vibrio cholerae MZO-2], gi\|14...	248.0	[0..5]	[306..3]
gi\|91227660, gi\|... - gi\|91227660\|ref\|ZP_01261937.1\| hypothetical protein V12G01_13284 [Vibrio alginolyticus 12G01], gi\|91...	248.0	[0..5]	[304..3]
gi\|229694875, gi... - gi\|229838509\|ref\|ZP_04458668.1\| putative glucokinase protein [Yersinia pestis biovar Orientalis str.... MURQ_YERPE - N-acetylmuramic acid 6-phosphate etherase OS=Yersinia pestis GN=murQ PE=3 SV=1 gi\|229895512, gi... - gi\|229895512\|ref\|ZP_04510683.1\| putative glucokinase protein [Yersinia pestis Pestoides A], gi\|22970... gi\|229688023, gi... - gi\|229899078\|ref\|ZP_04514222.1\| putative glucokinase protein [Yersinia pestis biovar Orientalis str.... gi\|21958070, gi\|... - gi\|22125205\|ref\|NP_668628.1\| N-acetylmuramic acid-6-phosphate etherase [Yersinia pestis KIM], gi\|219... gi\|167399091, gi... - gi\|167399091\|ref\|ZP_02304615.1\| glucokinase regulator homolog [Yersinia pestis biovar Antiqua str. U... gi\|149365380, gi... - gi\|149365380\|ref\|ZP_01887415.1\| putative glucokinase protein [Yersinia pestis CA88-4125], gi\|1492917... gi\|166206234, gi... - gi\|166212303\|ref\|ZP_02238338.1\| glucokinase regulator homolog [Yersinia pestis biovar Antiqua str. B... MURQ_YERPP - N-acetylmuramic acid 6-phosphate etherase OS=Yersinia pestis (strain Pestoides F) GN=murQ PE=3 SV=1 gi\|167057339, gi... - gi\|167423169\|ref\|ZP_02314922.1\| glucokinase regulator homolog [Yersinia pestis biovar Mediaevalis st... MURQ_YERPS - N-acetylmuramic acid 6-phosphate etherase OS=Yersinia pseudotuberculosis GN=murQ PE=2 SV=1 gi\|167421413, gi... - gi\|167421413\|ref\|ZP_02313166.1\| glucokinase regulator homolog [Yersinia pestis biovar Orientalis str... MURQ_YERPY - N-acetylmuramic acid 6-phosphate etherase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII)... gi\|167467715 - gi\|167467715\|ref\|ZP_02332419.1\| hypothetical protein YpesF_07409 [Yersinia pestis FV-1] MURQ_YERPB - N-acetylmuramic acid 6-phosphate etherase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) ... MURQ_YERPG - N-acetylmuramic acid 6-phosphate etherase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=murQ PE=... MURQ_YERP3 - N-acetylmuramic acid 6-phosphate etherase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31... gi\|166008108, gi... - gi\|166008108\|ref\|ZP_02229006.1\| glucokinase regulator homolog [Yersinia pestis biovar Antiqua str. E... gi\|165928252, gi... - gi\|165928252\|ref\|ZP_02224084.1\| glucokinase regulator homolog [Yersinia pestis biovar Orientalis str... MURQ_YERPS - N-acetylmuramic acid 6-phosphate etherase OS=Yersinia pseudotuberculosis serotype I (strain IP32953)... gi\|165939266, gi... - gi\|89105667\|ref\|ZP_01178182.1\| COG2103: Predicted sugar phosphate isomerase [Yersinia pestis biovar ... gi\|45437177, gi\|... - gi\|45442313\|ref\|NP_993852.1\| N-acetylmuramic acid-6-phosphate etherase [Yersinia pestis biovar Micro... MURQ_YERPA - N-acetylmuramic acid 6-phosphate etherase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=murQ PE... MURQ_YERPN - N-acetylmuramic acid 6-phosphate etherase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=murQ P... gi\|115348591, gi... - gi\|218929980\|ref\|YP_002347855.1\| N-acetylmuramic acid-6-phosphate etherase [Yersinia pestis CO92], g...	247.0	[0..12]	[304..3]

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Predicted Domain #1

Region A:
Residues: [1-306]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNAMNDIILK SLSTLITEQR NPNSVDIDRQ STLEIVRLXN EEDKLVPLAI ESCLPQISLA  60
   61 VEQIVQAFQQ GGRLIYIGAG TSGRLGVLDA SECPPTFGVS TEXVKGIIAG GECAIRHPVE 120
  121 GAEDNTKAVL NDLQSIHFSK NDVLVGIAAS GRTPYVIAGL QYAKSLGALT ISIASNPKSE 180
  181 XAEIADIAIE TIVGPEILTG SSRLKSGTAQ KXVLNXLTTA SXILLGKCYE NLXVDVQASN 240
  241 EKLKARAVRI VXQATDCNKT LAEQTLLEAD QNAKLAIMMI LSTLSKSEAK VLLERHQGKL 300
  301 RNALSK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	69.045757
Match:	1nriA
Description:	Hypothetical protein HI0754
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
glutamine-fructose-6-phosphate transaminase (isomerizing) activity	4.33396915400498	bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting aldoses and ketoses	2.20957751268338	bayes_pls_golite062009
glucose-6-phosphate isomerase activity	2.18594864654196	bayes_pls_golite062009
catalytic activity	1.89824366260041	bayes_pls_golite062009
intramolecular oxidoreductase activity	1.73798902031905	bayes_pls_golite062009
isomerase activity	1.38908530446706	bayes_pls_golite062009
intramolecular transferase activity, phosphotransferases	0.15645319812963	bayes_pls_golite062009
D-sedoheptulose 7-phosphate isomerase activity	0.0685465507529992	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: