| Protein: | gi|45773942, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 520 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|45773942, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
319.0 | [0..1] | [510..1] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MAIWRIINRS YLKYASNQLT RNYYTQVCLA SSTHVVKQTT KLSSFDIPNS DICTRPSNIF 60
61 QNLRFLATSA QTRKKEAEVD SDGPRLNEKI TGDYVRLVSE EGHCVVSLRE ALRRAKELQC 120
121 DLVEVQRDAK PPVCKIVKYS LELYKKAKVG KERAKAKRA
|
| Detection Method: |  |
| Confidence: | 33.154902 |
| Match: | 1tifA |
| Description: | TRANSLATION INITIATION FACTOR 3 N-TERMINAL DOMAIN |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [160-254] |
1 11 21 31 41 51
| | | | | |
1 EAIRPDIKEI RFTPKIEAKD LKFKSDQALK LMESGYRVKC LAVPDKDKHK ELEPEKLLEL 60
61 LFRFTCFIGD ALVESWPEAD RKGAVVIVRH AKFGP
|
| Detection Method: | |
| Confidence: | 25.39794 |
| Match: | 1tigA |
| Description: | TRANSLATION INITIATION FACTOR 3 C-TERMINAL DOMAIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.958050251236155 | bayes_pls_golite062009 |
| nucleic acid binding | 0.48141200069821 | bayes_pls_golite062009 |
| translation regulator activity | 0.34945991551838 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.34884152020441 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.340496260605169 | bayes_pls_golite062009 |
|
Region A: Residues: [255-429] |
1 11 21 31 41 51
| | | | | |
1 PKKGGVKLMK DIDIKSARVK EESPKPDSSK AGVATVDDQE DIEKSEPRFS VEQAQPVKFQ 60
61 NAYAKREPSS EFSGGRDASR FEPQSPNQHV NPQRPRFSNQ APNQQPTGRF DPQSPNQPPS 120
121 APRPQFPNQQ PTGRFDPQFP SQPPRPQFPN QAPNQQSTGR FNPQFPNQRP SPPQS
|
| Detection Method: | |
| Confidence: | 3.30103 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [430-520] |
1 11 21 31 41 51
| | | | | |
1 RFPDQAPNQQ PSGPSPNRHP DRQGPPPRFQ NQAPNQQPTG RFEPQPPNPP RAPPRPQTRL 60
61 PNETSNEQPT APGRSSGPAS GYGIFSTPKT K
|
| Detection Method: | |
| Confidence: | 1.17 |
| Match: | 1pk8A |
| Description: | Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP |
Matching Structure (courtesy of the PDB): |
|
