| Protein: | TC159_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1503 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TC159_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1013.0 | [0..639] | [1503..1] |
|
Region A: Residues: [1-356] |
1 11 21 31 41 51
| | | | | |
1 MDSKSVTPEP TNPFYASSGQ SGKTYASVVA AAAAAAADKE DGGAVSSAKE LDSSSEAVSG 60
61 NSDKVGADDL SDSEKEKPNL VGDGKVSDEV DGSLKEDSTT PEATPKPEVV SGETIGVDDV 120
121 SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV 180
181 KDVEEEDVGT KKDDEGESEL GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD 240
241 VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT 300
301 SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAAS
|
| Detection Method: |  |
| Confidence: | 21.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [357-469] |
1 11 21 31 41 51
| | | | | |
1 AVADNGTKEE ESVLGGIVDD AEEGVKLNNK GDFVVDSSAI EAVNVDVAKP GVVVVGDVEV 60
61 SEVLETDGNI PDVHNKFDPI GQGEGGEVEL ESDKATEEGG GKLVSEGDSM VDS
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [470-700] |
1 11 21 31 41 51
| | | | | |
1 SVVDSVDADI NVAEPGVVVV GAAKEAVIKE DDKDDEVDKT ISNIEEPDDL TAAYDGNFEL 60
61 AVKEISEAAK VEPDEPKVGV EVEELPVSES LKVGSVDAEE DSIPAAESQF EVRKVVEGDS 120
121 AEEDENKLPV EDIVSSREFS FGGKEVDQEP SGEGVTRVDG SESEEETEEM IFGSSEAAKQ 180
181 FLAELEKASS GIEAHSDEAN ISNNMSDRID GQIVTDSDED VDTEDEGEEK M
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [701-849] |
1 11 21 31 41 51
| | | | | |
1 FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR 60
61 SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL LQRLGHSAED SIAAQVLYRL 120
121 ALLAGRQAGQ LFSLDAAKKK AVESEAEGN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [850-1051] |
1 11 21 31 41 51
| | | | | |
1 EELIFSLNIL VLGKAGVGKS ATINSILGNQ IASIDAFGLS TTSVREISGT VNGVKITFID 60
61 TPGLKSAAMD QSTNAKMLSS VKKVMKKCPP DIVLYVDRLD TQTRDLNNLP LLRTITASLG 120
121 TSIWKNAIVT LTHAASAPPD GPSGTPLSYD VFVAQCSHIV QQSIGQAVGD LRLMNPSLMN 180
181 PVSLVENHPL CRKNREGVKV LP
|
| Detection Method: | |
| Confidence: | 49.39794 |
| Match: | 1h65A |
| Description: | Chloroplast protein translocon GTPase Toc34 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1052-1150] |
1 11 21 31 41 51
| | | | | |
1 NGQTWRSQLL LLCYSLKVLS ETNSLLRPQE PLDHRKVFGF RVRSPPLPYL LSWLLQSRAH 60
61 PKLPGDQGGD SVDSDIEIDD VSDSEQEDGE DDEYDQLPP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1151-1211] |
1 11 21 31 41 51
| | | | | |
1 FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG KKLGESEFGY 60
61 P
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1212-1411] |
1 11 21 31 41 51
| | | | | |
1 GEEDDPENGA PAAVPVPLPD MVLPPSFDSD NSAYRYRYLE PTSQLLTRPV LDTHGWDHDC 60
61 GYDGVNAEHS LALASRFPAT ATVQVTKDKK EFNIHLDSSV SAKHGENGST MAGFDIQNVG 120
121 KQLAYVVRGE TKFKNLRKNK TTVGGSVTFL GENIATGVKL EDQIALGKRL VLVGSTGTMR 180
181 SQGDSAYGAN LEVRLREADF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1412-1503] |
1 11 21 31 41 51
| | | | | |
1 PIGQDQSSFG LSLVKWRGDL ALGANLQSQV SVGRNSKIAL RAGLNNKMSG QITVRTSSSD 60
61 QLQIALTAIL PIAMSIYKSI RPEATNDKYS MY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
