| Protein: | HSFB4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 348 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HSFB4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
276.0 | [0..27] | [347..17] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MAMMVENSYG GYGGGGGERI QLMVEGQGKA VPAPFLTKTY QLVDDPATDH VVSWGDDDTT 60
61 FVVWRPPEFA RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KRGEKHLLCE 120
121 IHRRKTSQMI PQQHSPFMSH HHA
|
| Detection Method: |  |
| Confidence: | 33.0 |
| Match: | 1hksA |
| Description: | SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [144-348] |
1 11 21 31 41 51
| | | | | |
1 PPQIPFSGGS FFPLPPPRVT TPEEDHYWCD DSPPSRPRVI PQQIDTAAQV TALSEDNERL 60
61 RRSNTVLMSE LAHMKKLYND IIYFVQNHVK PVAPSNNSSY LSSFLQKQQQ QQPPTLDYYN 120
121 TATVNATNLN ALNSSPPTSQ SSITVLEDDH TNHHDQSNMR KTKLFGVSLP SSKKRSHHFS 180
181 DQTSKTRLVL DQSDLALNLM TASTR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
