| Protein: | gi|30683419, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 177 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30683419, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
169.0 | [0..14] | [173..128] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MAAVQQQQAM QKNTLYVGGL ADEVNESILH AAFIPFGDIK DVKTPLDQAN QKHRSFGFVT 60
61 FLEREDASAA MDNMDGAELY GRVLTVNYAL PE
|
| Detection Method: |  |
| Confidence: | 21.221849 |
| Match: | 2cqbA |
| Description: | Solution Structure of the RNA recognition motif in Peptidyl-prolyl cis-trans isomerase E |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.26550630643712 | bayes_pls_golite062009 |
| nucleic acid binding | 2.02897811404491 | bayes_pls_golite062009 |
| RNA binding | 1.45577328897026 | bayes_pls_golite062009 |
| mRNA binding | 0.274978159646657 | bayes_pls_golite062009 |
|
Region A: Residues: [93-177] |
1 11 21 31 41 51
| | | | | |
1 KIKGGEQGWA AHPLWADADT WFERQQQEKE ILKMQAENKA AMETAEELHR KKLAEDRQGE 60
61 MEEDTDTKND PMARAEADAL SHGDA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
