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View Structure Prediction Details

Protein: NAC7_ARATH
Organism: Arabidopsis thaliana
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAC7_ARATH.

Description E-value Query
Range
Subject
Range
gi|25402716, gi|... - pir||G86257 hypothetical protein [imported] - Arabidopsis thaliana, gi|10086508|gb|AAG12568.1|AC022...
477.0 [0..1] [395..1]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH  60
   61 EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YLRHSLIGMR KTLVFYKGRA 120
  121 PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.221849
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [164-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDYDSSPSH WYDDQLSFMA SELETNGQRR ILPNHHQQQQ HEHQQHMPYG LNASAYALNN  60
   61 PNLQCKQELE LHYNHLVQRN HLLDESHLSF LQLPQLESPK IQQDNSNCNS LPYGTSNIDN 120
  121 NSSHNANLQQ SNIAHEEQLN QGNQNFSSLY MNSGNEQVMD QVTDWRVLDK FVASQL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [340-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNEEAATASA SIQNNAKDTS NAEYQVDEEK DPKRASDMGE EYTASTSSSC QIDLWK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle