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View Structure Prediction Details

Protein: NAC7_ARATH
Organism: Arabidopsis thaliana
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAC7_ARATH.

Description E-value Query
Range
Subject
Range
gi|25402716, gi|... - pir||G86257 hypothetical protein [imported] - Arabidopsis thaliana, gi|10086508|gb|AAG12568.1|AC022...
477.0 [0..1] [395..1]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIEIDFIK DIDLYKIEPW DLQELCKIGH  60
   61 EEQSDWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YLRHSLIGMR KTLVFYKGRA 120
  121 PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRLAA VRR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.221849
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [164-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDYDSSPSH WYDDQLSFMA SELETNGQRR ILPNHHQQQQ HEHQQHMPYG LNASAYALNN  60
   61 PNLQCKQELE LHYNHLVQRN HLLDESHLSF LQLPQLESPK IQQDNSNCNS LPYGTSNIDN 120
  121 NSSHNANLQQ SNIAHEEQLN QGNQNFSSLY MNSGNEQVMD QVTDWRVLDK FVASQL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [340-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNEEAATASA SIQNNAKDTS NAEYQVDEEK DPKRASDMGE EYTASTSSSC QIDLWK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.380 N/A N/A a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.281 N/A N/A a.4.1 Homeodomain-like
View Download 0.247 N/A N/A a.4.5 "Winged helix" DNA-binding domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle