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View Structure Prediction Details

Protein: gi|15222874, gi|...
Organism: Arabidopsis thaliana
Length: 545 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222874, gi|....

Description E-value Query
Range
Subject
Range
LAC12_ARATH - Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1
400.0 [0..1] [535..1]

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Predicted Domain #1
Region A:
Residues: [1-545]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHVFVEVLV LISLVILELS YAFAPISSYQ WVVSYSQRFI LGGNKQVIVI NDMFPGPILN  60
   61 ATANDIIVVN IFNNLPEPFL MTWNGLQLRK NSWQDGVRGT NCPILPGTNW TYRFQVKDQI 120
  121 GSYFYFPTLL LQKAAGGYGA IRIYPPELVP VPFPKPDEEY DILIGDWFYL DHTVMRASLD 180
  181 AGHSLPNPDG ILFNGRGPEE TFFAFEPGKT YRLRISNVGL KTCLNFRIQD HDMLLVETEG 240
  241 TYVQKRVYSS LDIHVGQSYS ILVTAKTDPV GIYRSYYIFA TARFTDSYLG GIALIRYPGS 300
  301 PLDPVGQGPL APALQDFGSS VEQALSIRMD LNVGAARSNP QGSYHYGRIN VTRTIILHND 360
  361 VMLSSGKLRY TINGVSFVYP ETPLKLVDHF QLNDTIIPGM FPVYPSNKTP TLGTSVVDIH 420
  421 YKDFIHIVFQ NPLFGLESYH IDGYNFFVVG YGFGAWSESK KAGYNLVDAV SRSTVQVYPY 480
  481 SWTAILIAMD NQGMWNVRSQ KAEQWYLGQE LYMRVKGEGE EDPSTIPVRD ENPIPGNVIR 540
  541 CGKVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.09691
Match: 1aozA
Description: Ascorbate oxidase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle