| Protein: | TRB5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 287 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRB5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
204.0 | [0..1] | [278..1] |
|
Region A: Residues: [1-209] |
1 11 21 31 41 51
| | | | | |
1 MGNQKLKWTA EEEEALLAGI RKHGPGKWKN ILRDPEFADQ LIHRSNIDLK DKWRNLSVPP 60
61 GTQSLTNKAR PAKVKEEGDT PAADANDAVT IPRPIPTIPP PPGRRTLPSE LIPDENTKNA 120
121 PRYDGVIFEA LSALADGNGS DVSSIYHFIE PRHEVPPNFR RILSTRLRRL AAQSKLEKVS 180
181 TFKSIQNFYK IPDPSGTKIG VPKPKETHT
|
| Detection Method: |  |
| Confidence: | 19.39794 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [210-287] |
1 11 21 31 41 51
| | | | | |
1 KLRQANNQTS ADSQQMIEEA AITAACKVVE AENKIDVAKL AAEEFEKMTK IAEENRKLLV 60
61 IATEMHELCS CGETMLLA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.793 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.622 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.599 | a.118.1 | ARM repeat |
| View | Download | 0.592 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.577 | a.118.1 | ARM repeat |
