| Protein: | gi|42563136, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 597 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42563136, gi|....
| Description | E-value | Query Range |
Subject Range |
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610.0 | [0..1] | [593..1] |
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607.0 | [0..1] | [597..100] |
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598.0 | [0..1] | [597..1] |
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594.0 | [0..1] | [597..1] |
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593.0 | [0..1] | [597..1] |
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|
589.0 | [0..1] | [597..1] |
|
Region A: Residues: [1-182] |
1 11 21 31 41 51
| | | | | |
1 MFKKAVEAKS HQRLSGADRK KLRRTVRNRL PLLTDELLDA ILPPKVEITL SKFQNRVIVY 60
61 SIEGGCPMFF DIDGRGTEIF PTVFALWEAP EMLPSFMLKG GEVSRYIIGG ADLMFPGILI 120
121 PPQGYPSFSA GEIWAVKVPG NLAPIAVGCT TMSSEEARKA GLRGKALRIT HYYRDFLWES 180
181 AE
|
| Detection Method: |  |
| Confidence: | 32.0 |
| Match: | 2ausC |
| Description: | No description for 2ausC was found. |
|
Region A: Residues: [183-312] |
1 11 21 31 41 51
| | | | | |
1 GHYVPNAGFM EDVVMEDPSY LAPGSGEDIL DTSASTGNEE DESALETAST SAADAKNDAE 60
61 VHVVGSMNEL YLVDDVCATE TNTDKQITLS PEEVDTLLDQ CLLQALHTTL KEKDLPIPGS 120
121 TLWANHVLPC
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.287 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.283 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.283 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.267 | N/A | N/A | a.282.1 | Description not found. |
| View | Download | 0.259 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.255 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.235 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.234 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.227 | N/A | N/A | a.1.1 | Globin-like |
|
Region A: Residues: [313-402] |
1 11 21 31 41 51
| | | | | |
1 RPSGLTLDIK KSSHKKLSKW LQSKASGGMI SVKEDKHKKE IVLISVNRSH PDYKSFKPEK 60
61 KKAEVSESPG ERSTAQAQSE KGLEIIEVYK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.689 | c.47.2 | RNA 3'-terminal phosphate cyclase, RPTC, insert domain |
| View | Download | 0.689 | c.47.2 | RNA 3'-terminal phosphate cyclase, RPTC, insert domain |
| View | Download | 0.668 | d.58.56 | Description not found. |
| View | Download | 0.601 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.601 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.601 | c.47.2 | RNA 3'-terminal phosphate cyclase, RPTC, insert domain |
| View | Download | 0.601 | c.47.2 | RNA 3'-terminal phosphate cyclase, RPTC, insert domain |
| View | Download | 0.568 | d.93.1 | SH2 domain |
| View | Download | 0.568 | d.93.1 | SH2 domain |
| View | Download | 0.557 | d.58.3 | Protease propeptides/inhibitors |
|
Region A: Residues: [403-489] |
1 11 21 31 41 51
| | | | | |
1 SSIHNSAIFA SVGEDKGNLY TASEATDVVF KYIEKENLVK PTNKSMVVLD PILCDALFKG 60
61 AIKKGSAYPS EIHKKDVGST FVGRMQP
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| Detection Method: | |
| Confidence: | 4.221849 |
| Match: | 1v32A |
| Description: | Solution structure of the SWIB/MDM2 domain of the hypothetical protein At5g08430 from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [490-597] |
1 11 21 31 41 51
| | | | | |
1 NHVVMRGGGE PVVRKGAVKP VQIMTERRQG NKKVTKVTGM ETFLIDPDSF GSELQKKFAC 60
61 STSVGELPGK KGYEVLIQGG VIDNLARYMV EHYGVPKRYI EVLDKTRK
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| Detection Method: | |
| Confidence: | 27.221849 |
| Match: | 2if1A |
| Description: | HUMAN TRANSLATION INITIATION FACTOR EIF1, NMR, 29 STRUCTURES |
Matching Structure (courtesy of the PDB): |
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