| Protein: | gi|42563136, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 597 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42563136, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
610.0 | [0..1] | [593..1] |
|
|
607.0 | [0..1] | [597..100] |
|
|
598.0 | [0..1] | [597..1] |
|
|
594.0 | [0..1] | [597..1] |
|
|
593.0 | [0..1] | [597..1] |
|
|
589.0 | [0..1] | [597..1] |
|
Region A: Residues: [1-182] |
1 11 21 31 41 51
| | | | | |
1 MFKKAVEAKS HQRLSGADRK KLRRTVRNRL PLLTDELLDA ILPPKVEITL SKFQNRVIVY 60
61 SIEGGCPMFF DIDGRGTEIF PTVFALWEAP EMLPSFMLKG GEVSRYIIGG ADLMFPGILI 120
121 PPQGYPSFSA GEIWAVKVPG NLAPIAVGCT TMSSEEARKA GLRGKALRIT HYYRDFLWES 180
181 AE
|
| Detection Method: |  |
| Confidence: | 32.0 |
| Match: | 2ausC |
| Description: | No description for 2ausC was found. |
|
Region A: Residues: [183-312] |
1 11 21 31 41 51
| | | | | |
1 GHYVPNAGFM EDVVMEDPSY LAPGSGEDIL DTSASTGNEE DESALETAST SAADAKNDAE 60
61 VHVVGSMNEL YLVDDVCATE TNTDKQITLS PEEVDTLLDQ CLLQALHTTL KEKDLPIPGS 120
121 TLWANHVLPC
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [313-402] |
1 11 21 31 41 51
| | | | | |
1 RPSGLTLDIK KSSHKKLSKW LQSKASGGMI SVKEDKHKKE IVLISVNRSH PDYKSFKPEK 60
61 KKAEVSESPG ERSTAQAQSE KGLEIIEVYK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [403-489] |
1 11 21 31 41 51
| | | | | |
1 SSIHNSAIFA SVGEDKGNLY TASEATDVVF KYIEKENLVK PTNKSMVVLD PILCDALFKG 60
61 AIKKGSAYPS EIHKKDVGST FVGRMQP
|
| Detection Method: | |
| Confidence: | 4.221849 |
| Match: | 1v32A |
| Description: | Solution structure of the SWIB/MDM2 domain of the hypothetical protein At5g08430 from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [490-597] |
1 11 21 31 41 51
| | | | | |
1 NHVVMRGGGE PVVRKGAVKP VQIMTERRQG NKKVTKVTGM ETFLIDPDSF GSELQKKFAC 60
61 STSVGELPGK KGYEVLIQGG VIDNLARYMV EHYGVPKRYI EVLDKTRK
|
| Detection Method: | |
| Confidence: | 27.221849 |
| Match: | 2if1A |
| Description: | HUMAN TRANSLATION INITIATION FACTOR EIF1, NMR, 29 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
