| Protein: | gi|42572007 |
| Organism: | Arabidopsis thaliana |
| Length: | 297 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42572007.
| Description | E-value | Query Range |
Subject Range |
|
|
307.0 | [0..2] | [290..32] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MSGASSVSSI CSSNVSLIPT GPQVFINFRG KDLRKGFMSF LKPALKKEKI NVFIDEQEER 60
61 GKYLISLFDT IGESKIALVI FSEGYCESHW CMDELVKIKE YMDQNR
|
| Detection Method: |  |
| Confidence: | 3.522879 |
| Match: | 1fyvA |
| Description: | Toll-like receptor 1, TLR1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [107-168] |
1 11 21 31 41 51
| | | | | |
1 LIIIPIFYRL DLDVVKDLTG KFGDNFWDLV DKYQPEPKKL HKWTEALFSV CELFSLILPK 60
61 HS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.710 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.657 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.657 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.551 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.516 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
|
Region A: Residues: [169-297] |
1 11 21 31 41 51
| | | | | |
1 DISDRDFVKS IVKAVKKVQK NFFQRRNGEI EYQDFSVPAC KLTITMHESP NEEAVQVTVL 60
61 NEFYQMKNQS PVPSYEFKFW VDLTRPKGNV FMIDARDLSI AWSEDSNHWT WLPLPNQNSN 120
121 DGNCIFEKC
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.651 | N/A | N/A | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.614 | N/A | N/A | d.110.1 | Profilin (actin-binding protein) |
| View | Download | 0.605 | N/A | N/A | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.529 | N/A | N/A | c.97.1 | Cytidine deaminase-like |
| View | Download | 0.479 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
