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View Structure Prediction Details

Protein: gi|30681061
Organism: Arabidopsis thaliana
Length: 575 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30681061.

Description E-value Query
Range
Subject
Range
STR6_ARATH - Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana GN=STR6 PE=2 SV=1
476.0 [0..1] [575..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTSSCGDHE KQRIEDEEQY GVLLYYKYTS LVSFYESSCN SLGLLGRVRL SPKGVNVTVG  60
   61 GKLTALEEHI AAAKSNCLFE GTDFKLASCH HPLNDKVAEE CGFTSLSIRV VEELVTFS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 1jw9B
Description: Molybdenum cofactor biosynthesis protein MoeB
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [119-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PCPPLKPPEI SNAGKHLSAA EFHSVLQSAN GKSENKELVL LDARNLYETR IGKFESENVE  60
   61 TLDPEIRQYS DLPTWIDQNA EKMKGKNVLM YCTGGIRCEM ASAYIRSKGA GFENTFQLYG 120
  121 GIQRYLEQFP SGGFFKGKNF VFDHRISVGS SKEDIIGSCL LCNNTFDDYS PRCRCRLCRM 180
  181 LVLVCNHCRV KGDIYICELC RKHGKGE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.0
Match: 1cwrA
Description: CDC25b
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.17567731011816 bayes_pls_golite062009
protein binding 0.26324773851743 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [326-575]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPLSLDPLNQ PSESNGDNTR RKLRILCLHG FRQNASSFKG RTGSLAKKLK NIAELVFIDA  60
   61 PHELQFIYQT ATPPSGVCNK KFAWLVSSDF DKPSETGWTV AQCQFDPLQY QTQTEGFDKS 120
  121 LTYLKTAFEE KGPFDGILGF SQGAAMAAAV CGKQEQLVGE IDFRFCVLCS GFTPWPLLEM 180
  181 KEKRSIKCPS LHIFGSQPGK DRQIVTQASS DLAGLFEDGC ATIVEHDFGH IIPTKSPYID 240
  241 EIKAFLYQFI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.0
Match: 1fj2A
Description: Acyl protein thioesterase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 0.900012765484033 bayes_pls_golite062009
catalytic activity 0.629869101256762 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.475177657121888 bayes_pls_golite062009
binding 0.424949448217625 bayes_pls_golite062009
carboxylesterase activity 0.0264147222103929 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle