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View Structure Prediction Details

Protein: gi|42562707
Organism: Arabidopsis thaliana
Length: 255 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42562707.

Description E-value Query
Range
Subject
Range
gi|15232645, gi|... - gi|62319037|dbj|BAD94164.1| putative lysophospholipase [Arabidopsis thaliana], gi|51969868|dbj|BAD43...
165.0 [0..1] [255..1]

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Predicted Domain #1
Region A:
Residues: [1-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYSHQSMGS GSRNARGYEF GRTYVVRPKG KHQATLVWLH GLGDNGSSSS QLMDSLHLPN  60
   61 IKWICPTAPS RPVTSLGGFT CTAWFDVGEI SEDGHDDLEG LDASASHIAN LLSSEPADVK 120
  121 VGIGGFSMGA AISLYSATCY ALGRYGTGHA YPINLQAVVG LSGWLPGWKS LRSKIECSFE 180
  181 AARRAASLPI ILTHGTSDDV VPYRFGEKSA QSLGMAGFRL AMFKPYEGLG HYTVPREMDE 240
  241 VVHWLTTMLG LEGSR

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Detection Method: PSI-BLAST
Confidence: 29.39794
Match: 1fj2A
Description: Acyl protein thioesterase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.24106351016868 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.09488027320166 bayes_pls_golite062009
lipase activity 0.849473630399459 bayes_pls_golite062009
carboxylesterase activity 0.424330502936163 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 0.277033874372149 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle