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View Structure Prediction Details

Protein: F26_ARATH
Organism: Arabidopsis thaliana
Length: 744 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for F26_ARATH.

Description E-value Query
Range
Subject
Range
gi|13096098 - gi|13096098|gb|AAF04293.2|AF190739_1 fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase [Arab...
852.0 [0..1] [744..1]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSGASKNTE EDDDGSNGGG GQLYVSLKME NSKVEGELTP HVYGSLPLIG SWDPSKALPM  60
   61 QRESALMSEL SFVVPPDHET LDFKFLLKPK NRNTPCIVEE GENRLLTGGS LQGDARLALF 120
  121 RLEGDVIVEF RVFINADRVS PIDLATSWRA YRENLQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.73
Match: 1cqyA
Description: beta-amylase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [157-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSTVRGIPDV SINPDPKSAE CPLESLELDL AHYEVPAPAP SANSYLVYAA DNAENPRSLS  60
   61 ASGSFRNDST PKAAQRNSED SGVTVDGSPS AKEMTIVVPD SSNIYSAFGE AESKSVETLS 120
  121 PFQQKDGQKG LFVDRGVGSP RL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.39794
Match: 1zunB
Description: Crystal Structure of a GTP-Regulated ATP Sulfurylase Heterodimer from Pseudomonas syringae
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.6234987165625 bayes_pls_golite062009
nucleic acid binding 1.47229025149175 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [299-744]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKSLSASSFL IDTKQIKNSM PAAAGAVAAA AVADQMLGPK EDRHLAIVLV GLPARGKTFT  60
   61 AAKLTRYLRW LGHDTKHFNV GKYRRLKHGV NMSADFFRAD NPEGVEARTE VAALAMEDMI 120
  121 AWMQEGGQVG IFDATNSTRV RRNMLMKMAE GKCKIIFLET LCNDERIIER NIRLKIQQSP 180
  181 DYSEEMDFEA GVRDFRDRLA NYEKVYEPVE EGSYIKMIDM VSGNGGQIQV NNISGYLPGR 240
  241 IVFFLVNTHL TPRPILLTRH GESMDNVRGR IGGDSVISDS GKLYAKKLAS FVEKRLKSEK 300
  301 AASIWTSTLQ RTNLTASSIV GFPKVQWRAL DEINAGVCDG MTYEEVKKNM PEEYESRKKD 360
  361 KLRYRYPRGE SYLDVIQRLE PVIIELERQR APVVVISHQA VLRALYAYFA DRPLKEIPQI 420
  421 EMPLHTIIEI QMGVSGVQEK RYKLMD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 126.0
Match: 2axnA
Description: Crystal structure of the human inducible form 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle