| Protein: | gi|42571593 |
| Organism: | Arabidopsis thaliana |
| Length: | 603 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42571593.
| Description | E-value | Query Range |
Subject Range |
|
|
497.0 | [0..1] | [603..1] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MRLSSLPINT LINLPKSLFL ISPFRFRNLN RSLTVASRIS STLLRVSGVS SRPCGYWFST 60
61 NAAMTNVGEE DKQSIP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [77-512] |
1 11 21 31 41 51
| | | | | |
1 SIELKENIEL TDKERKIFDR LLSTLRYCNL DTQLRVAGGW VRDKLLGKES DDIDIAIDNM 60
61 SGSEFLDKFK EYLSSRDEEV QGDTVIERNP DQSKHLETAK LRIYDQWIDF VNLRSEEYTE 120
121 NSRIPTMKFG TAKDDAFRRD LTINSLFYNI NSGAVEDLTE RGIDDLKSGK IVTPLPAKAT 180
181 FLDDPLRVLR AVRFGARFGF TLDEELKEAA SSEEVRVALG EKISRERIGN EIDLMISGNG 240
241 PVSAVTYLSD LKLFSVVFAL PSSAEPSPPE NCGSLSQSYL EAMWSLLKTP RPGKFSGEQR 300
301 RLALYAAMFL PFRKTVYKDT KGKSIPVVNH IFKFSMKRKT SDAETVMNIH QTTERFRSLI 360
361 PSLEVKKDVE LDELTWAADI LEHWKSITLN DPVIPATSKI RVLTGFLLRD IKDFWRVSLL 420
421 TSLLLSATVD GSNDHQ
|
| Detection Method: | |
| Confidence: | 68.30103 |
| Match: | 1ou5A |
| Description: | tRNA CCA-adding enzyme, C-terminal domains; tRNA CCA-adding enzyme, head domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transferase activity, transferring phosphorus-containing groups | 2.63905617158862 | bayes_pls_golite062009 |
| transferase activity | 2.28535908015265 | bayes_pls_golite062009 |
| tRNA binding | 1.96218336722441 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.28424599869932 | bayes_pls_golite062009 |
| RNA binding | 1.26469116227089 | bayes_pls_golite062009 |
| catalytic activity | 0.75232920999699 | bayes_pls_golite062009 |
| polynucleotide adenylyltransferase activity | 0.747086661208511 | bayes_pls_golite062009 |
| nucleic acid binding | 0.56250895409788 | bayes_pls_golite062009 |
| binding | 0.248197954076327 | bayes_pls_golite062009 |
|
Region A: Residues: [513-603] |
1 11 21 31 41 51
| | | | | |
1 DIGQLDFQLE RMRETYLTVE ATIHELGLDK IWDAKPLVNG REIMQIAELK GGSRLIREWK 60
61 LLTWQLAYPN GTAEECKEWM RDIKAKRQRI E
|
| Detection Method: | |
| Confidence: | 1.19 |
| Match: | 1mivA |
| Description: | tRNA CCA-adding enzyme, C-terminal domains; tRNA CCA-adding enzyme, head domain |
Matching Structure (courtesy of the PDB): |
|
