| Protein: | gi|15219364 |
| Organism: | Arabidopsis thaliana |
| Length: | 1939 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for gi|15219364.
|
Region A: Residues: [1-213] |
1 11 21 31 41 51
| | | | | |
1 MLSKVSPSGE LLNRWRRIEE DEEENDDSDP SAVRRLNQRK EQWFTDAFTL LISLPKDTHI 60
61 WCGHGDIMGP LIETFYNYFK DDRVDSPLKV LWKRISEEMR LCAQCICQHH QTQEMYEKEY 120
121 ECSSVGPLLV VLRKLDEERV TRHLQEINLK IEKGTYDPDH HHAEVVSVMY EVLMFPFFFD 180
181 DMSLCTEFEK FIESIDNIHE LAFAENQEFP VSN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [214-358] |
1 11 21 31 41 51
| | | | | |
1 PVRAPPAIAQ EIHWNSGDGG TAFRVSGTET KDISRPLIYM AWDDITVPVS SNFSLLARRI 60
61 GHKIALLIVL RGYKMNPPCP PFECAHMWGP SLVSSYKDSS LHISLRQPAI DLVQAILVSD 120
121 ATALLASLLR NNTGKFMGYE IQYDD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [359-568] |
1 11 21 31 41 51
| | | | | |
1 DDMESEKNDE MTVDIETWLS SSAVEIKGTL GWKVATGSDD GGPGKESKNS VTVSKMCLTL 60
61 IRTLKRLTTC YLVQIGDECR KQWTWVPEMG ETFILSLSDP DDNVRQFGKS MLEHVSNTRG 120
121 PFELCPSKLS DPAPFFLFIV QVAEGRGGGH YRRSEEFRRG MTCVRLLEIL PVVLGKLRVS 180
181 REESCDTRGT LKDASDLKWL PDLIDWGRSQ
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [569-1072] |
1 11 21 31 41 51
| | | | | |
1 LKVVVAYWKR ALVALLDILQ GSNSDACSSA VQAIRHVLSS GDTIDNALTL LNSDDVDIEQ 60
61 LAEQISRLVP KANEYQILKP VDVVGKLQDN MMDLTVDETE KESLKNLPSL HKSHQPDINK 120
121 TLLPIKNISQ ISSLKKSTSS IDASKLSALV LSERDVTVSS SNIVRDLPTT NAEPSKAAGM 180
181 SREAEKRQNV EDPVSSGIRP NLKKATDELG PRGTSKEAQK SAISNAKGMD LRKVVNETEV 240
241 DPLDLALKSL KRQSLPLAKS GPIVPKRQVI QLCAPVNKKS DRWQRQEAGF KRFRPPKLED 300
301 WFRKILQMDY YAIVGLASTK KDESQNVGKF REVPVRFGSP EQYIQIFQPL VLEEFKAQLQ 360
361 SSFQEISSLE EIYYGVISVL SIERVDDFHF VRFMQDENDG SNSKSFSEND LVLFTKEHPE 420
421 NSNVGVNMMG KVEGREWDDK KRTSILNVRL YLQNASSRLN QARRNLLERS QWHASRILNI 480
481 TSQIREFQAL SCIKDIPVLP LILS
|
| Detection Method: | |
| Confidence: | 10.522879 |
| Match: | 1epwA |
| Description: | Botulinum neurotoxin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1073-1730] |
1 11 21 31 41 51
| | | | | |
1 PMNDSNYDSE VKRSDLRSLP HSLQQILKSS FNESQLQAIS VAIGSSNLMK AFDISLIQGP 60
61 PGTGKTRTIV AIISGLLASA SHKTSDRGNS EPGHSSSTSR QGMNPSVAVA RAWQDAALAK 120
121 QLNDNSETNR KIAEKNGRGR VLICAQSNAA VDELVSRISS LGIYGRDGKM FKPYLVRVGN 180
181 AKTVHSNSMP FFLDTLVDQR LAEERMRINE SKSNKGADSS ALLRSNLEKV VDQITHFEAK 240
241 RANINQESLD AKDKPENEHH NKDDDGKLMS DAELGIRLRR LYEQKRKIYK DLSAVQAQER 300
301 KANYEMRTLK QKLRKSILKE AQIVVTTLSG CGGDLYSVCA ESLAAHKFGS PSEDNLFDAV 360
361 VIDEAAQALE PATLIPLQLL KSRGTKCIMV GDPKQLPATV LSNVASKFLY ECSMFERLQR 420
421 AGYPILMLTQ QYRMHPEICR FPSMHFYDNK LLNGVDMSSK SAPFHENHHL GPYVFYDIVD 480
481 GQEHRSGDSS SVCNEQEAEA AVQLLRFFKK RYPSEFVAGR IGIITPYKRQ LAVLRSRFTG 540
541 AFGAQVTADM EMNTVDGFQG KEVDILVLST VRATHSAPDG VNQSRIGFVA DVRRMNVALT 600
601 RAKLSLWVLG NTRTLQRDHN WGALVKDAKE REVIIPVKRP YNYMFGENVM EQNHSENL
|
| Detection Method: | |
| Confidence: | 69.69897 |
| Match: | 2gjkA |
| Description: | No description for 2gjkA was found. |
|
Region A: Residues: [1731-1939] |
1 11 21 31 41 51
| | | | | |
1 PKNFPKPDKQ HSRRKEQRAE TSSDRKLRKT DGDVVPISSK GSESKHTRRN AKEEASSQRE 60
61 KLVASCEKVT SEETLRRSHE KKEKMKGREK SSNPEITDAN SSKNENSNEW KKSKKASSKL 120
121 DSSKRANPTD KIGQQDRQIN KGNASNQGGV EDMISKRKQQ REAVAAILNS SLIPSHKPKP 180
181 PKRPLSPGST AGSHTRPPKA IKESTKNNS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
