| Protein: | MA659_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 549 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MA659_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
231.0 | [0..5] | [546..2188] |
|
|
222.0 | [0..5] | [539..1289] |
|
|
220.0 | [0..5] | [546..1188] |
|
|
219.0 | [0..5] | [546..1188] |
|
|
219.0 | [0..5] | [546..75] |
|
Region A: Residues: [1-356] |
1 11 21 31 41 51
| | | | | |
1 MSKSQIESTW SSLLQELEII WKEVGETETE REKILIEIEE ECREVYNRKI EKVKEEKIRI 60
61 KQEIADSEAR VIDICSVMEE PPILGRHHQS DQQSGNGRSL KDELVKILQK LEEMEKRKSE 120
121 RKIQFIQVID DIRCVREEIN GESDDETCSS DFSADESDLS LRKLEELHRE LYTLQEQKRN 180
181 RVKQIQDNIR TLESLCSVLG LNFRETVTKI HPSLVDTEGS RSISNETLDK LASSVQQWHE 240
241 TKIQRMQELQ DLVTTMLEFW NLMDTPAEEQ QKFMDVSCNI AATVSEITKP NSLSIDLLEE 300
301 VKAELCRLEE LKWSKMKELV LKKRSELEEI CRRTHIVLEE EDIAVENVIK AIESGD
|
| Detection Method: |  |
| Confidence: | 17.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [357-451] |
1 11 21 31 41 51
| | | | | |
1 VNPENILEQI EYRAGKVKEE ALSRKEILEK ADKWLNACEE ENWLEEYNQD ENRYNAGKGS 60
61 HLILKRAEKA RALVNKLPAM VEALASKITI WESEK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.838 | N/A | N/A | a.59.1 | PAH2 domain |
| View | Download | 0.816 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.777 | N/A | N/A | a.24.26 | Description not found. |
| View | Download | 0.706 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.706 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.685 | N/A | N/A | a.59.1 | PAH2 domain |
| View | Download | 0.679 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.585 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.532 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
|
Region A: Residues: [452-549] |
1 11 21 31 41 51
| | | | | |
1 EYEFLFDGNR LLSMLEEYTE LREEKEQERR RKRDLKKHQG QVTSEQDKGS VTKPQSAKKG 60
61 LKVSTNKRFV SSPHTPQTDS PHSAKSNQSF STPLSRHG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
