| Protein: | gi|42568692, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 406 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42568692, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
333.0 | [0..84] | [404..12] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MAALTLHHHH HHRHHSCLQA SGHLSRRLYH RIFSSFPRNP VKDLNFRLSL ADFSSFSLST 60
61 RGTVFAVRAL STVAVEESSE KK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [83-406] |
1 11 21 31 41 51
| | | | | |
1 MVKGIRVYEH GGPEVLKWED VEVGEPKEGE IRVKNKAIGL NFIDVYFRKG VYKPASMPFT 60
61 PGMEAVGEVV AVGSGLTGRM IGDLVAYAGN PMGAYAEEQI LPADKVVPVP SSIDPIVAAS 120
121 IMLKGMTAQF LLRRCFKVEP GHTILVHAAA GGVGSLLCQW ANALGATVIG TVSTNEKAAQ 180
181 AKEDGCHHVI MYKNEDFVSR VNDITSGKGV NVVYDSVGKD TFKGSLACLK SRGYMVSFGQ 240
241 SSGSPDPIPL SDLAPKSLFL TRPSMMHYNE TRDELLECAG EVFANVTSGI LKARVNHKYP 300
301 LSRVADAHAD LENRITSGSV VLLP
|
| Detection Method: | |
| Confidence: | 76.39794 |
| Match: | 1qorA |
| Description: | Quinone oxidoreductase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| alcohol dehydrogenase (NAD) activity | 2.94416173750168 | bayes_pls_golite062009 |
| alcohol dehydrogenase activity, zinc-dependent | 2.26153457113968 | bayes_pls_golite062009 |
| oxidoreductase activity | 1.98266850665386 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| retinol dehydrogenase activity | 1.04497968922284 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.03956654822048 | bayes_pls_golite062009 |
| binding | 0.982999356179965 | bayes_pls_golite062009 |
| nucleic acid binding | 0.980245559401213 | bayes_pls_golite062009 |
| DNA binding | 0.940078857029005 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.93258555725042 | bayes_pls_golite062009 |
| transcription regulator activity | 0.854100257756792 | bayes_pls_golite062009 |
| RNA binding | 0.843556706364142 | bayes_pls_golite062009 |
| chaperone binding | 0.593082758130032 | bayes_pls_golite062009 |
| protein binding | 0.507836099271263 | bayes_pls_golite062009 |
| coenzyme binding | 0.46570602169425 | bayes_pls_golite062009 |
| NAD or NADH binding | 0.46286018152257 | bayes_pls_golite062009 |
| transcription factor activity | 0.35056694435192 | bayes_pls_golite062009 |
