| Protein: | PIF7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 366 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIF7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
157.0 | [0..1] | [335..40] |
|
Region A: Residues: [1-166] |
1 11 21 31 41 51
| | | | | |
1 MSNYGVKELT WENGQLTVHG LGDEVEPTTS NNPIWTQSLN GCETLESVVH QAALQQPSKF 60
61 QLQSPNGPNH NYESKDGSCS RKRGYPQEMD RWFAVQEESH RVGHSVTASA SGTNMSWASF 120
121 ESGRSLKTAR TGDRDYFRSG SETQDTEGDE QETRGEAGRS NGRRGR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [167-242] |
1 11 21 31 41 51
| | | | | |
1 AAAIHNESER RRRDRINQRM RTLQKLLPTA SKADKVSILD DVIEHLKQLQ AQVQFMSLRA 60
61 NLPQQMMIPQ LPPPQS
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1am9A |
| Description: | SREBP-1a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.12507195426228 | bayes_pls_golite062009 |
| nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
| DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
| transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
| transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |
|
Region A: Residues: [243-366] |
1 11 21 31 41 51
| | | | | |
1 VLSIQHQQQQ QQQQQQQQQQ QQQFQMSLLA TMARMGMGGG GNGYGGLVPP PPPPPMMVPP 60
61 MGNRDCTNGS SATLSDPYSA FFAQTMNMDL YNKMAAAIYR QQSDQTTKVN IGMPSSSSNH 120
121 EKRD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
