| Protein: | RDM3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1493 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RDM3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
567.0 | [0..534] | [1492..89] |
|
|
550.0 | [0..629] | [1368..280] |
|
|
540.0 | [0..534] | [1492..89] |
|
|
532.0 | [0..25] | [535..107] |
|
|
517.0 | [0..524] | [1492..275] |
|
|
509.0 | [0..544] | [1492..90] |
|
|
506.0 | [0..570] | [1490..1821] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MDRKGKGKQV AGSDSYSGGQ KRKNSVEFRD EGLRIKKRKN PEVLQFFEES AEVGYYGGSS 60
61 DEDDDGLGFL NDMEDEPEVE ESSKAGKGEK GKSSFVFPKE EDLNEEEFDR IMEERYKPGS 120
121 GFLRYAD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [128-297] |
1 11 21 31 41 51
| | | | | |
1 DDIKDAIEMD ALAPTSKDPP IWKVKCAIGR ERRSVFCLMH KFVELRKIGT KLEIISVFSV 60
61 DHVKGFIFIE ADKEHDVLEA CKSLVGIYAT RMVLLPKAET PNLLTVQKKT KKVSEGTWAR 120
121 VKNGKYKGDL AQIVAVSDTR NKALIKLIPR IDIQALTQKY GGGVTVQKGQ
|
| Detection Method: | |
| Confidence: | 8.09691 |
| Match: | 2exuA |
| Description: | No description for 2exuA was found. |
|
Region A: Residues: [298-533] |
1 11 21 31 41 51
| | | | | |
1 TPAPRLISSS ELEEFRPLIQ VRRDRDTGIT FEHLDSLMLK DGYLYKKVSL DSISSWGVIP 60
61 TKDELLKFTP VDRKETGDVE WISEIYGEER KKKILPTCRE GGKGEGSGGG KGEGSGGGKG 120
121 EGSRGGKGEG SSDFKSESSY ELYNLVCFSR KDFGLIVGVD DKGDGYKVLK EGIDGPVVVT 180
181 VGKKEMQNGP FDSKFTALDL NKKQISVNDV VKISKGPSEG KQGVVRQVYR GIIFLY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [534-1493] |
1 11 21 31 41 51
| | | | | |
1 DESEEENGGY FCCKSQSCEK VKLFTEESNE KTGGFDGTAF EDFVSSPKSP LSPEKEWQPR 60
61 ERYNSSNQGD IGSTYSIGQK LRIRVGPLKG YLCRVIALRY SDVTVKLDSQ HKIFTVKSEH 120
121 LAEVRDRNTV LSTSGDAGTG SFQPFGMLGT ESSTGDWAIG AGTSSEGGNW NIGGPSTDSH 180
181 ESLNIERNMV QLCREKNPWG GSKPTSDVSP TVADDNTSAW ANAAAENKPA SASDQPGGWN 240
241 PWGKTPASEA GTVSGWGDTS ASNVEASSWE KQGASTSNVA DLGSWGTHGG SSGGNKQDED 300
301 SVWGKLCEAS ESSQKKEESS WGKKGGSDGE SSWGNKDGNS SASKKDGVSW GQQDKGSDES 360
361 KGGSAWSNQC GDFGSGKKKD GSSGWNKSAE DSNANSKGVP DWGQPNDGSS WGKKGDGAAS 420
421 WGKKDDGGSW GKKDDGNKDD GGSSWGKKDD GQKDDGGSSW EKKFDGGSSW GKKDDGGSSW 480
481 GKKDDGGSLW GKKDDGGSSW GKEDDGGSLW GKKDDGESSW GKKDDGESSW GKKDDGGSSW 540
541 GKKDEGGYSE QTFDRGGRGF GGRRGGGRRG GRDQFGRGSS FGNSEDPAPW SKPSGGSSWG 600
601 KQDGDGGGSS WGKENDAGGG SSWGKQDNGV GSSWGKQNDG SGGGSSWGKQ NDAGGGSSWG 660
661 KQDSGGDGSS WGKQDGGGDS GSAWGKQNNT SGGSSWGKQS DAGGGSSWGK QDGGGGGSSW 720
721 GKQDGGGGSG SAWGKQNETS NGSSWGKQND SGGGSSWGKQ DGGGGGSSWG KQNDGGGGSS 780
781 WGKQGDGGSK PWNEHSGGGR GFGERRGGGG FRGGRNQSGR GGRSFDGGRS SSWKTDNQEN 840
841 TWKSDQSGGS DWKKGWGEDS NNSKPSGSSA GGCAGNWPSW DTNSKKETND KPGDDSKSAW 900
901 GTSNDQVNTD NNNDSWNKKP NNDVGTSGEA DNAWGGKTNA VAPSPSGSAA WGTGDKKTGW 960
961
|
| Detection Method: | |
| Confidence: | 130.0 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
