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View Structure Prediction Details

Protein: AB9I_ARATH
Organism: Arabidopsis thaliana
Length: 470 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AB9I_ARATH.

Description E-value Query
Range
Subject
Range
AB8I_ARATH - UPF0051 protein ABCI8, chloroplastic OS=Arabidopsis thaliana GN=ABCI8 PE=2 SV=1
555.0 [0..1] [470..1]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLFAIGFS KFSPQPTSDY SKLLKVFHPK PYSLKFLFLK TLNPTRFFKV RANDGTEPSD  60
   61 KLQQYFQNQD YDKKYGFLEN IDSFTIPKGL SEETIRLISK LKKE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [105-470]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAWILEYRLK AYAKFLKLEE PKWSDNRYPL LDLQDMCFYS APKKKPTLNS SDIADEADDP  60
   61 KLLEEFDRLD VPLTKKKKCS PKVAVDAVYN SESIAITNKE PLEKSGVIFC SISEAIRKYP 120
  121 DLIKKYLGRV VPSDDNYYAA LNTAVFSDGS FCYIPKNTRC PMPLSSYFRM NSIENTGQFE 180
  181 RTLIVAEEGS FVEYSEGCTA ISHDKNQLHA AVVELYCAEG AEIKYSTRGL CAGDRSKISW 240
  241 TQVEKGFAIT WKYPSVVLEG DDSVGEAENA RNTSTCDSML IGDNAAANTY PYIQVKNPSA 300
  301 RIEHEASTSK IGEDQIFYFQ QRGIDHERAL AAMISGFCRD VFNKLPNEFG AEVNQLLSIK 360
  361 LEGSVG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.0
Match: 1vh4A
Description: Crystal structure of a stabilizer of iron transporter
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.334765053110546 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle