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View Structure Prediction Details

Protein: gi|15241581
Organism: Arabidopsis thaliana
Length: 192 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15241581.

Description E-value Query
Range
Subject
Range
gi|53981366, gi|... - gi|55733857|gb|AAV59364.1| unknown protein [Oryza sativa Japonica Group], gi|53981366|gb|AAV24920.1|...
167.0 [0..15] [192..1064]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRILNINQY HPQLGDDGMV APWILWRLWK NRNDLVFKGK QFDAPDMELG MQNAASVASA  60
   61 GCLETPTRTC FGWV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGLSMTQSAL VTEAEAMRWA VLSLSRLNYR KVIFESDSQQ LVSILVDNGD MPILDPILQD  60
   61 IKLLLQHFEE TKFVFMHRGG NGVADRIAKE SLSLENYDPK LYSIVPYWVK SFVELDKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.39794
Match: 2ehgA
Description: No description for 2ehgA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle