| Protein: | gi|15239455 |
| Organism: | Arabidopsis thaliana |
| Length: | 347 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15239455.
| Description | E-value | Query Range |
Subject Range |
|
|
307.0 | [0..2] | [346..12] |
|
Region A: Residues: [1-113] |
1 11 21 31 41 51
| | | | | |
1 MGLDYYDILK VNRNATEDDL KKSYRKLAMK WHPDKNPNTK TEAEAKFKQI SEAYEAKYEV 60
61 MFQVLSDPQK RAVYDQYGEE GLSDMPPPGS TGNNGRAGGF NPRNAEDIFA EFF
|
| Detection Method: |  |
| Confidence: | 21.0 |
| Match: | 1bq0A |
| Description: | J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| unfolded protein binding | 3.04403163860617 | bayes_pls_golite062009 |
| heat shock protein binding | 2.17994194200939 | bayes_pls_golite062009 |
| binding | 2.03854863870179 | bayes_pls_golite062009 |
| chaperone binding | 1.61155546076854 | bayes_pls_golite062009 |
| protein binding | 1.35701123337504 | bayes_pls_golite062009 |
| transcription regulator activity | 1.2131700498174 | bayes_pls_golite062009 |
| nucleic acid binding | 1.12971478797926 | bayes_pls_golite062009 |
| DNA binding | 0.8788643398536 | bayes_pls_golite062009 |
| Hsp70 protein binding | 0.541755903922701 | bayes_pls_golite062009 |
| catalytic activity | 0.106988907594358 | bayes_pls_golite062009 |
|
Region A: Residues: [114-199] |
1 11 21 31 41 51
| | | | | |
1 GSSPFGFGSA GGPGRSMRFQ SDGGGGMFGG FGGGNNGSEN NIFRTYSEGT PAPKKPPPVE 60
61 SKLPCSLEEL YSGSTRKMKI SRSIVD
|
| Detection Method: | |
| Confidence: | 5.30103 |
| Match: | 2cttA |
| Description: | Solution structure of zinc finger domain from human DnaJ subfamily A menber 3 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [200-347] |
1 11 21 31 41 51
| | | | | |
1 ANGRQAQETE ILTIVVKPGW KKGTKIKFPD KGNEQVNQLP ADLVFVIDEK PHDLFTRDGN 60
61 DLITSRRVTL AEAIGGTTVN INTLDGRNLP VGVAEIVSPG YEFVVPGEGM PIAKEPRNKG 120
121 DLKIKFDVQF PARLTTEQKS ALKRVLAG
|
| Detection Method: | |
| Confidence: | 36.221849 |
| Match: | 2q2gA |
| Description: | No description for 2q2gA was found. |
