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View Structure Prediction Details

Protein: ACR2_ARATH
Organism: Arabidopsis thaliana
Length: 500 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACR2_ARATH.

Description E-value Query
Range
Subject
Range
gi|115453517, gi... - gi|50916533|ref|XP_468663.1| putative ACT domain containing protein, ACR4, with alternative splicing...
311.0 [0..10] [489..13]
ACR3_ARATH - ACT domain-containing protein ACR3 OS=Arabidopsis thaliana GN=ACR3 PE=2 SV=1
310.0 [0..1] [489..1]
gi|92890833 - gi|92890833|gb|ABE90521.1| ACT domain, putative [Medicago truncatula]
301.0 [0..9] [489..1]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKVCWPYFD PDFDNLGERI YGPPCRVYID NDSIQDCTVV KVNSENKQGL LLEVVQILTD  60
   61 MNLIITKSYI SSDGGWFMDV FHVKDEHGNK LTDKSVINHI KHAIGTSRRE SDFIKASEAN 120
  121 NNSLEPQLAD HGEHTAIEMT GTDRPGLFSE IFAAFADLHC NVMEAHAWSH NARLACIAYV 180
  181 SDDNTHTPID DPSRLASIED HLSTVIRAT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.045757
Match: 2nyiA
Description: No description for 2nyiA was found.

Predicted Domain #2
Region A:
Residues: [210-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADPASNSTHV GHKENETDGF LAGQGKGCMN SNMERRLHQL MLSVRDFDEP FCEPSSLSLL  60
   61 SSKLEYCDHK ERKTTIVSIG NCEE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.469 a.60.6 DNA polymerase beta, N-terminal domain-like
View Download 0.469 a.60.6 DNA polymerase beta, N-terminal domain-like
View Download 0.455 d.58.19 Bacterial exopeptidase dimerisation domain
View Download 0.397 d.58.19 Bacterial exopeptidase dimerisation domain
View Download 0.395 d.146.1 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
View Download 0.395 d.146.1 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
View Download 0.358 a.60.6 DNA polymerase beta, N-terminal domain-like
View Download 0.358 a.60.6 DNA polymerase beta, N-terminal domain-like
View Download 0.319 a.60.6 DNA polymerase beta, N-terminal domain-like
View Download 0.281 a.74.1 Cyclin-like

Predicted Domain #3
Region A:
Residues: [294-500]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGYSIVTVKS KDRRRLMFDT ICTLVDMQYV IFHAALRSDG ADAFQEYFIR HIDGRALNTE  60
   61 GEKERVIKCL EAAIERRVCE GVKLELCAEN RVGLLSDITR VLRENGLTVV RADVETQGQK 120
  121 SLNAFYVRDI SGNKIDMEFV ESVKKEMRPI HLEVKNEDTK IDTVGSDEPT ASASATPQRQ 180
  181 PQPHRFSLGD ILRSQMERLS LNFVPTK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.221849
Match: 1u8sA
Description: Crystal structure of putative glycine cleavage system transcriptional repressor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle