YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ACR2_ARATH
Organism: Arabidopsis thaliana
Length: 500 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACR2_ARATH.

Description E-value Query
Range
Subject
Range
gi|115453517, gi... - gi|50916533|ref|XP_468663.1| putative ACT domain containing protein, ACR4, with alternative splicing...
311.0 [0..10] [489..13]
ACR3_ARATH - ACT domain-containing protein ACR3 OS=Arabidopsis thaliana GN=ACR3 PE=2 SV=1
310.0 [0..1] [489..1]
gi|92890833 - gi|92890833|gb|ABE90521.1| ACT domain, putative [Medicago truncatula]
301.0 [0..9] [489..1]

Back

Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKVCWPYFD PDFDNLGERI YGPPCRVYID NDSIQDCTVV KVNSENKQGL LLEVVQILTD  60
   61 MNLIITKSYI SSDGGWFMDV FHVKDEHGNK LTDKSVINHI KHAIGTSRRE SDFIKASEAN 120
  121 NNSLEPQLAD HGEHTAIEMT GTDRPGLFSE IFAAFADLHC NVMEAHAWSH NARLACIAYV 180
  181 SDDNTHTPID DPSRLASIED HLSTVIRAT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.045757
Match: 2nyiA
Description: No description for 2nyiA was found.

Predicted Domain #2
Region A:
Residues: [210-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADPASNSTHV GHKENETDGF LAGQGKGCMN SNMERRLHQL MLSVRDFDEP FCEPSSLSLL  60
   61 SSKLEYCDHK ERKTTIVSIG NCEE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [294-500]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGYSIVTVKS KDRRRLMFDT ICTLVDMQYV IFHAALRSDG ADAFQEYFIR HIDGRALNTE  60
   61 GEKERVIKCL EAAIERRVCE GVKLELCAEN RVGLLSDITR VLRENGLTVV RADVETQGQK 120
  121 SLNAFYVRDI SGNKIDMEFV ESVKKEMRPI HLEVKNEDTK IDTVGSDEPT ASASATPQRQ 180
  181 PQPHRFSLGD ILRSQMERLS LNFVPTK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.221849
Match: 1u8sA
Description: Crystal structure of putative glycine cleavage system transcriptional repressor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle