| Protein: | gi|30689668 |
| Organism: | Arabidopsis thaliana |
| Length: | 406 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30689668.
| Description | E-value | Query Range |
Subject Range |
|
|
255.0 | [0..45] | [406..1] |
|
|
236.0 | [0..44] | [406..64] |
|
|
233.0 | [0..41] | [406..5] |
|
|
233.0 | [0..43] | [406..14] |
|
|
214.0 | [0..39] | [406..1] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MDPTWIDSLT RSCEANSNTN HKRKRERETL KHREKKKKRF RERKMASKLC DSCKSATAAL 60
61 YCRPDAAFLC LSCDSKVHAA
|
| Detection Method: |  |
| Confidence: | 3.522879 |
| Match: | 2ffwA |
| Description: | No description for 2ffwA was found. |
|
Region A: Residues: [81-141] |
1 11 21 31 41 51
| | | | | |
1 NKLASRHARV WMCEVCEQAP AHVTCKADAA ALCVTCDRDI HSANPLARRH ERVPVTPFYD 60
61 S
|
| Detection Method: | |
| Confidence: | 0.957 |
| Match: | 2csvA |
| Description: | Solution structure of the zf-B_box type2 domain of human tripartite motif protein TRIM29 isoform alpha |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [142-235] |
1 11 21 31 41 51
| | | | | |
1 VSSDGSVKHT AVNFLDDCYF SDIDGNGSRE EEEEEAASWL LLPNPKTTTT ATAGIVAVTS 60
61 AEEVPGDSPE MNTGQQYLFS DPDPYLDLDY GNVD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.687 | a.60.14 | Description not found. |
| View | Download | 0.390 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.291 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.291 | a.24.17 | Group V grass pollen allergen |
|
Region A: Residues: [236-406] |
1 11 21 31 41 51
| | | | | |
1 PKVESLEQNS SGTDGVVPVE NRTVRIPTVN ENCFEMDFTG GSKGFTYGGG YNCISHSVSS 60
61 SSMEVGVVPD GGSVADVSYP YGGPATSGAD PGTQRAVPLT SAEREARVMR YREKRKNRKF 120
121 EKTIRYASRK AYAEMRPRIK GRFAKRTDTN ESNDVVGHGG IFSGFGLVPT F
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
