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Protein Overview: gi|30689668

General Information:
Name(s) found: gi|30689668 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|30689668|ref|NP_197875.2| zinc finger (B-box type) family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 406 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPTWIDSLT RSCEANSNTN HKRKRERETL KHREKKKKRF RERKMASKLC DSCKSATAAL  60
   61 YCRPDAAFLC LSCDSKVHAA NKLASRHARV WMCEVCEQAP AHVTCKADAA ALCVTCDRDI 120
  121 HSANPLARRH ERVPVTPFYD SVSSDGSVKH TAVNFLDDCY FSDIDGNGSR EEEEEEAASW 180
  181 LLLPNPKTTT TATAGIVAVT SAEEVPGDSP EMNTGQQYLF SDPDPYLDLD YGNVDPKVES 240
  241 LEQNSSGTDG VVPVENRTVR IPTVNENCFE MDFTGGSKGF TYGGGYNCIS HSVSSSSMEV 300
  301 GVVPDGGSVA DVSYPYGGPA TSGADPGTQR AVPLTSAERE ARVMRYREKR KNRKFEKTIR 360
  361 YASRKAYAEM RPRIKGRFAK RTDTNESNDV VGHGGIFSGF GLVPTF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] PSI-BLAST 3.522879 No description for 2ffwA was found.
    2 View Details [81..141] FFAS03 0.957 Solution structure of the zf-B_box type2 domain of human tripartite motif protein TRIM29 isoform alpha
    3 View Details [142..235] deduced N/A No confident structure predictions are available.
    4 View Details [236..406] MSA 21.26399 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle