| Protein: | gi|15242078 |
| Organism: | Arabidopsis thaliana |
| Length: | 501 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15242078.
| Description | E-value | Query Range |
Subject Range |
|
|
434.0 | [0..1] | [497..1] |
|
|
430.0 | [0..6] | [499..19] |
|
|
427.0 | [0..28] | [499..27] |
|
Region A: Residues: [1-359] |
1 11 21 31 41 51
| | | | | |
1 MSSHDTYQKL ILFCLSIFFL QNILKNVEGL ACNWGTQASH PLPPNIVVKL LRDNGFNKVK 60
61 LFEADPGALR ALGKSGIQVM VGIPNDLLAT MASTVTNAEL WVQQNVSQYI SRYGTDIRYV 120
121 AVGNEPFLKT YNNRFVRSTY PALQNVQAAL VKAGLGRQVK VTVPLNADVY ESSDGLPSSG 180
181 DFRSDIKTLM ISIVRFLADS VSPITFNIYP FLSLNADPNF PREYAFFPNG GGGGGAKPVV 240
241 DGSISYTNVF DANFDTLVSA LEKNGFDANK IEIIVGEVGW PTDGDQNANP AMAQRFNQGL 300
301 LNRILQGQGT PRRRMAPEVY IFSLVDEDAK SIDPGKFERH WGIFSYDGAV KYPLSLGNG
|
| Detection Method: |  |
| Confidence: | 86.221849 |
| Match: | 2cygA |
| Description: | Crystal structure at 1.45- resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [360-501] |
1 11 21 31 41 51
| | | | | |
1 RPLVPTKGVR YQAREWCVLS TQAAGNGAAT WQASATYACQ NADCTSLGPG SSCAALDPTA 60
61 NASYAFNMYF QKMDHRRGSC DFNNLGVVTK IDPSSGSCRF PIEIDTSRQQ MSNPPPRNSG 120
121 ASEAKYRLGA AVVMVICLVF SN
|
| Detection Method: | |
| Confidence: | 29.69897 |
| Match: | PF07983.4 |
| Description: | No description for PF07983.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.430 | N/A | N/A | d.21.1 | Diaminopimelate epimerase-like |
| View | Download | 0.288 | N/A | N/A | d.227.1 | OsmC-like |
| View | Download | 0.286 | N/A | N/A | d.104.1 | Class II aaRS and biotin synthetases |
| View | Download | 0.279 | N/A | N/A | d.104.1 | Class II aaRS and biotin synthetases |
| View | Download | 0.246 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.242 | N/A | N/A | c.44.1 | Phosphotyrosine protein phosphatases I |
| View | Download | 0.238 | N/A | N/A | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.230 | N/A | N/A | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
