| Protein: | gi|42567989 |
| Organism: | Arabidopsis thaliana |
| Length: | 1545 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42567989.
| Description | E-value | Query Range |
Subject Range |
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1209.0 | [0..17] | [1540..2] |
|
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1185.0 | [0..15] | [1541..1] |
|
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1173.0 | [0..15] | [1541..1] |
|
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1168.0 | [0..14] | [1541..1036] |
|
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1161.0 | [0..15] | [1537..1] |
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1158.0 | [0..15] | [1538..1] |
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1155.0 | [0..15] | [1537..1] |
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Region A: Residues: [1-1079] |
1 11 21 31 41 51
| | | | | |
1 MKETEGNAQC YAIFVVFLIN IIVGSHVWIE DPGAAWIDGE VVKINGEEVH AHTTNGKTVV 60
61 ANIANVFPKD TEAPPGGVDD MTKLSYLHEP GVLNNLAMRY ELNEIYTYTG NILIAVNPFQ 120
121 RLPHLYDTHM MEQYKGAGFG ELSPHVFAIA EVAYRAMINE GKSNSILVSG ESGAGKTETT 180
181 KMLMRYLAYL GGRSGVEGRT VEQQVLESNP VLEAFGNAKT LRNNNSSRFG KFVELQFDNC 240
241 GRISGAAVRT YLLERSRVCQ ISDPERNYHC FYLLCAAPPE EREKFKLGDP KLFHYLNQSK 300
301 CYKLDGVDDT EEYLATRRAM DIVGISEEEQ DAIFRVVAAI LHLGNVNFAK GKEIDSSVLK 360
361 DEKSRYHLDV CAELLRCDAK KMEDALIKRV MVTPEEVITR TLDPDSATGS RDALAKTIYS 420
421 RLFDWLVDKI NNSIGQDPNS KTIIGVLDIY GFESFKINSF EQFCINFTNE KLQQHFNQHV 480
481 FKMEQEDYTK EEINWSYIEF VDNKDVLELI EKKPGGVIAL LDEACMFPKS THETFAQKLY 540
541 QTFKNYKRFT KPKLSRTSFA ISHYAGEVTY QADLFLDKNK DYVVAEHQDL LIASSDTFVA 600
601 GLFPRLPEET SSKTKFSSIG SRFKLQLQSL METLSSTEPH YIRCVKPNNV LKPAIFENVN 660
661 VIQQLRCGGV LEAIRISCAG YPTKRTFYEF LNRFGVLAPE VLEGNYDDKV ACKMLLDKIG 720
721 LKGYELGKTK VFLRAGQMAE LDARRAEVLG NAARRIQRQS RTFIACKEFR ALRGAAIVLQ 780
781 SNCRGKLACN LYEEMRRQAA AVKIQKIFRR HIARESYLRI RHSTITVQTA LRGMVARNEF 840
841 RFRKQMKAAT IIQARLRSHL THSYYKQLQK AALSTQCGWR SRVARKELRT LKMAARDTGA 900
901 LREAKDKLEK RVEELTWRLQ LEKRQRTELE EAKTQEYAKQ QEALETMRLQ VEEANAAVIR 960
961 EREAARKAIE EAPPVIKETP VLVEDTEKIN SLTSEVEALK ASLQAERQAA ENLRKAFSEA1020
1021 EARNSELATE LENATRKADQ LHESVQRLEE KLSNSESEIQ VLRQQALAIS PTSRTMATR
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 2dfsA |
| Description: | No description for 2dfsA was found. |
|
Region A: Residues: [1080-1147] |
1 11 21 31 41 51
| | | | | |
1 SKTMLLPRTP ENGNYLNGGT KTTPDMTLAV REPESEEKPQ KHLNEKQQEN QDLLVKCISQ 60
61 NLGYNGDK
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| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [1148-1545] |
1 11 21 31 41 51
| | | | | |
1 PVAACVIYKC LLHWRSFEVE RTSVFDRIIQ TIATAIEVPD NNEVLAYWLS NSATLLLLLQ 60
61 RTLKATGAAS LTPQRRRTTS ASLFGRMSQG LRGSPQSAGL SFLNRQGLTK LDDLRQVEAK 120
121 YPALLFKQQL TAFLEKIYGM IRDNLKKEIS PLLGLCIQAP RTSRASLVKG RAQANAVAQQ 180
181 ALIAHWQSIR KSLNSYLNLM KANNAPPFLV RKVFTQIFSF INVQLFNSLL LRRECCSFSN 240
241 GEYVKAGLAE LEQWCIEATD EYAGSAWDEL RHIRQAVGFL VIHQKPKKTL DEITRELCPV 300
301 LSIQQLYRIS TMYWDDKYGT HSVSSDVIAN MRVMMTEDSN NAVSSSFLLD DDSSIPFTVE 360
361 DISKSMQQVD VNDIEPPQLI RENSGFGFLL TRKEGSTS
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| Detection Method: | |
| Confidence: | 45.69897 |
| Match: | 2f6hX |
| Description: | Myosin V cargo binding domain |
Matching Structure (courtesy of the PDB): |
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