YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|115468142, gi...

General Information:
Name(s) found: gi|51535675 [NCBI NR]
gi|115468142 [NCBI NR]
gi|113595710 [NCBI NR]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • gi|51535675|dbj|BAD37694.1| putative myosin heavy chain PCR43 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115468142|ref|NP_001057670.1| Os06g0488200 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113595710|dbj|BAF19584.1| Os06g0488200 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 1529 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTKVNIIVG SHVWAEDPEI AWVDGEVVKI KGEEAEIQAT NGKTITANLS KLYPKDMEAA  60
   61 AGGVDDMTKL SYLHEPGVLQ NLATRYELNE IYTYTGNILI AVNPFQRLPH LYDPHMMQQY 120
  121 KGAPFGELSP HVFAVADVAY RAMIHEGKSN SILVSGESGA GKTETTKMLM RYLAYLGGRA 180
  181 ATEGRTVEQQ VLESNPVLEA FGNAKTVRNN NSSRFGKFVE IQFDKQGRIS GAAVRTYLLE 240
  241 RSRVCQISDP ERNYHCFYLL CAAPQEEVEK YKLGNPKTFH YLNQSNCYEL VGVSDAHEYL 300
  301 ATRRAMDIVG ISTQEQDAIF RVVAAILHIG NIEFAKGKEV DSSVLKDDKS KFHLDTTAEL 360
  361 LMCDSGALGD ALCKRVMVTP EEVIKRSLDP YNATVSRDGL AKTIYSRLFD WLVDKINSSI 420
  421 GQDPNSKSLI GVLDIYGFES FKLNSFEQFC INYTNEKLQQ HFNQHVFKME QEEYTKEQID 480
  481 WSYIEFVDNQ DVLDLIEKKP GGVIALLDEA CMFPKSTHET FSQKLYQTFQ KHKRFVKPKL 540
  541 SRTDFTICHY AGEVLYQSDQ FLDKNKDYVV AEHQELLSAS KCSFISGLFP PLPEETSKSS 600
  601 KFSSIGARFK QQLQALMETL NSTEPHYIRC VKPNNVLKPA IFENVNVMQQ LRCGGVLEAI 660
  661 RISCAGYPTR RTFYEFLHRF GILAQEALEG NCDEKVACKR ILEKKGLVGF QIGKTKVFLR 720
  721 AGQMAELDAR RTEVLGAAAK TIQGKIRTHI MRKKFVNWRK ASISVQAIWR GRLACKLFDQ 780
  781 MRRVAAAIKV QKNQRMHQAR RSYKHLNASV LVVQTALRAM AARNTFRYKK QSKAAVKIQA 840
  841 RYRCHTAHVY HKKLKRAAIV AQCRWRGKIA RKELRKLKME ARETGALKEA KDKLEKKVEE 900
  901 LTWRVQLEKR MRTDLEEAKA QELSKLQSSM EALQAKLDET SAKLVKEREV ARAIEEAPPV 960
  961 VQQTEVLVQD TEKVDSLTAE VEELKTSLQS EKQRADDLEK KRSEEQQANE EKQKKMEETD1020
 1021 VKMRQFQEYL RRLEEKLANV ESENKVLRQQ AVSMAPSKIL SGRSKSILQR NAESVHVSSG1080
 1081 DSKAAPESNN ISSPKKEFDF DDKPQKSLNE KQQENQDLLI RCIAQHLGFA GNRPVAACII1140
 1141 YKCLLHWRSF EVERTSVFDR IIQTIGHAIE TQDNNEVLAY WLSNASTLLL LLQRTLKASG1200
 1201 STGMAPQRRR SSSATLFGRM TQSFRGTPQG VNLSLINGSM VSGVETLRQV EAKYPALLFK1260
 1261 QQLTAYVEKI YGMIRDNLKK EISPLLGLCI QAPRTSRASL MKGSSRSNTN TAAQQALIAH1320
 1321 WQGIVKSLGN FLNMLKLNNV PPFLVRKVFT QIFSFINVQL FNSLLLRREC CSFSNGEYVK1380
 1381 AGLAELEHWC YRATDEYAGS AWDELKHIRQ AIGFLVIHQK PKKTLDEISH DLCPVLSIQQ1440
 1441 LYRISTMYWD DKYGTHSVSP EVISNMRVLM TEDSNNPVSN SFLLDDDSSI PFSVDDISKS1500
 1501 MEQIDISDIE PPPLIRENSG FVFLLPPPE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1053] PSI-BLAST 1000.0 No description for 2dfsA was found.
    2 View Details [1054..1126] PSI-BLAST 7.39794 No description for 2i1jA was found.
    3 View Details [1127..1409] PSI-BLAST 3.30103 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain
    4 View Details [1410..1529] PSI-BLAST 22.522879 Myosin V cargo binding domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle