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View Structure Prediction Details

Protein: gi|18420047
Organism: Arabidopsis thaliana
Length: 359 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18420047.

Description E-value Query
Range
Subject
Range
gi|26450541, gi|... - gi|28950929|gb|AAO63388.1| At5g19850 [Arabidopsis thaliana], gi|26450541|dbj|BAC42383.1| unknown pro...
281.0 [0..1] [359..1]

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Predicted Domain #1
Region A:
Residues: [1-359]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTSIFAAL PFTNFEFPSL FRVKNSSIIS FSETHFLRQS ISTAIVRSPT KRGIVSVSCS  60
   61 SVTDEASSEE LQVRTLTWKW KGYSIRYQCA GTSGPALVLV HGFGANSDHW RKNTPILGKT 120
  121 HRVYSIDLIG YGYSDKPNPR EFGGEPFYTF ETWGEQLNDF CLDVVKDEAF FICNSIGGLV 180
  181 GLQAAVSKPE ICRGLMLINI SLRMLHIKKQ PFIGRPFIKS FQNLLRNTPV GKLFFKSIAK 240
  241 PETVKSILCQ CYHDSSQVTD ELVEAILRPG LEPGAVDVFL EFICYSGGPL PEDLLPLVKC 300
  301 PVLIAWGEKD PWEPIELGRA YSNFDAVEDF VVLPDAGHCP QDEKPEMVNP LIESFVARH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.0
Match: 1s8oA
Description: Human soluble Epoxide Hydrolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.76673721118052 bayes_pls_golite062009
hydrolase activity 1.64928663394 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.647157802814698 bayes_pls_golite062009
3-oxoadipate enol-lactonase activity 0.5562494815394 bayes_pls_golite062009
carboxylesterase activity 0.0777997779852618 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle