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View Structure Prediction Details

Protein: gi|42567895
Organism: Arabidopsis thaliana
Length: 236 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42567895.

Description E-value Query
Range
Subject
Range
gi|44681356, gi|... - gi|45773876|gb|AAS76742.1| At5g16800 [Arabidopsis thaliana], gi|44681356|gb|AAS47618.1| At5g16800 [A...
159.0 [0..1] [209..1]

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Predicted Domain #1
Region A:
Residues: [1-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFPRGFVE NSSMEEPKIA RRPTICFRPI NPSDLERLEQ IHRDIFPIRY ESEFFQNVVN  60
   61 GGDIVSWAAV DRSRPDGHSE ELIGFVTAKI VLAKESEISD LIRYDSSKGE GTLVYILTLG 120
  121 VVETYRKRGI AKALINEVVK YSSGIPVCRG VYLHVIAHNN PAIRLYKRMS FRCVRRLHGF 180
  181 YLINGQHFDS YLFVYFINGS RSPCSPLYVQ NTSIFCILNS VCCDVSLRFL HRWGYR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 1yr0A
Description: Crystal structure of phosphinothricin acetyltransferase from agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
N-acetyltransferase activity 7.00365363424591 bayes_pls_golite062009
N-acyltransferase activity 6.89887266957108 bayes_pls_golite062009
histone acetyltransferase activity 6.0067454358666 bayes_pls_golite062009
lysine N-acetyltransferase activity 6.0067454358666 bayes_pls_golite062009
acetyltransferase activity 5.86411968036951 bayes_pls_golite062009
acyltransferase activity 4.72881921515185 bayes_pls_golite062009
transferase activity, transferring acyl groups 4.70793039001114 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 4.69837915971204 bayes_pls_golite062009
3.29707445389818 bayes_pls_golite062009
glycylpeptide N-tetradecanoyltransferase activity 2.89438063539752 bayes_pls_golite062009
myristoyltransferase activity 2.89438063539752 bayes_pls_golite062009
transferase activity 2.87429355361226 bayes_pls_golite062009
catalytic activity 1.97933499002461 bayes_pls_golite062009
chromatin binding 0.835290138763972 bayes_pls_golite062009
binding 0.648162149708657 bayes_pls_golite062009
protein binding 0.098756769132141 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle