YRC Public Data Repository - Protein Structure Prediction

Protein:	TYOBP_BOVIN
Organism:	Bos taurus
Length:	108 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TYOBP_BOVIN.

Description	E-value	Query Range	Subject Range
gi\|16945316, gi\|... - gi\|41386800\|ref\|NP_777052.1\| TYRO protein tyrosine kinase binding protein [Bos taurus], gi\|16945316\|...	147.0	[0..1]	[108..1]
gi\|73948444 - gi\|73948444\|ref\|XP_533687.2\| PREDICTED: similar to TYRO protein tyrosine kinase binding protein isof...	138.0	[0..1]	[108..66]
gi\|55741821 - ref\|NP_999367.1\| immunoreceptor DAP12 [Sus scrofa] TYOBP_PIG - TYRO protein tyrosine kinase-binding protein OS=Sus scrofa GN=TYROBP PE=2 SV=1	137.0	[0..1]	[108..1]
TYOBP_MOUSE - TYRO protein tyrosine kinase-binding protein OS=Mus musculus GN=Tyrobp PE=1 SV=1	136.0	[0..1]	[108..1]
gi\|38158005, gi\|... - gi\|5706450\|emb\|CAB52288.1\| killer activating receptor associated protein, isoform b [Homo sapiens], ...	132.0	[0..1]	[108..1]
TYOBP_PANTR - TYRO protein tyrosine kinase-binding protein OS=Pan troglodytes GN=TYROBP PE=3 SV=1	130.0	[0..1]	[108..1]
TYOBP_RAT - TYRO protein tyrosine kinase-binding protein OS=Rattus norvegicus GN=Tyrobp PE=3 SV=1	130.0	[0..1]	[108..1]
TYOBP_MACMU - TYRO protein tyrosine kinase-binding protein OS=Macaca mulatta GN=TYROBP PE=3 SV=1	129.0	[0..1]	[108..1]

Back

Predicted Domain #1

Region A:
Residues: [1-108]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGLRPSDRL LSLLLTVGGL SLVLAQSECN CSSVSPGVLA GIVLGDLMLT LLIALAVYYL  60
   61 GRLVPRGRGA TEVTRKQHIP ETESPYQELQ GQRTDVYSDL NTQRPYYK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term	Confidence	Notes
catalytic activity	0.0450544645706373	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: