| Protein: | gi|30694123, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 733 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30694123, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
754.0 | [0..1] | [733..1] |
|
|
673.0 | [0..9] | [730..40] |
|
|
631.0 | [0..14] | [730..1] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MGVSQTDGRM EGWLYTIRHN RFGLQFSRKR YFVLHENNLT SFKSVPSDHN EEPERRASLD 60
61 CCIRVTDNGR ESFHRKILFI FTLYNTSNHL DQLKLGASSP EEAAKWIRSL QDASQKGFPI 120
121 PDCEFFVSHA EKGLVKLDVS KRNRRKNSVD WTNYSSTNYS S
|
| Detection Method: |  |
| Confidence: | 5.07 |
| Match: | 1u5fA |
| Description: | Crystal Structure of the PH Domain of SKAP-Hom with 8 Vector-derived N-terminal Residues |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [162-382] |
1 11 21 31 41 51
| | | | | |
1 TSLNVETNVA PDVIAPSPWK IFGCQNGLRL FKEAKDWDSR GRHWDDHPAI MAVGVIDGTS 60
61 EDIFNTLMSL GPLRSEWDFC FYKGNVVEHL DGHTDIIHLQ LYSDWLPWGM NRRDLLLRRY 120
121 WRREDDGTYV ILCHSVYHKN CPPKKGYVRA CVKSGGYVVT PANNGKQSLV KHMVAIDWRS 180
181 WNLYMRPSSA RSITIRVVER VAALREMFKA KQGHGFTEFV S
|
| Detection Method: | |
| Confidence: | 34.0 |
| Match: | 2psoA |
| Description: | No description for 2psoA was found. |
|
Region A: Residues: [383-530] |
1 11 21 31 41 51
| | | | | |
1 GEFLDTKPCL SKINTMPLKT EAKEVDLETM HAEEMDKPTS ARNSLMDLND ASDEFFDVPE 60
61 PNESTEFDSF IDSSPYSQGH QLKIPTPAGI VKKLQDLAIN KKGYMDLQEV GLEENNTFFY 120
121 GATLQKDPSL TLPCSWSTAD PSTFLIRG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [531-665] |
1 11 21 31 41 51
| | | | | |
1 NNYLKNQQKV KAKGTLMQMI GADWISSDKR EDDLGGRIGG LVQEYAAKGS PEFFFIVNIQ 60
61 VPGSAMYSLA LYYMLKTPLE EHPLLESFVN GDDAYRNSRF KLIPHISKGS WIVKQSVGKK 120
121 ACLVGQVLEV CYTRG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.221 | c.97.1 | Cytidine deaminase-like |
| View | Download | 0.211 | c.97.1 | Cytidine deaminase-like |
| View | Download | 0.206 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
|
Region A: Residues: [666-733] |
1 11 21 31 41 51
| | | | | |
1 KNYLELDIDV GSSTVARGVT NLVLGYLNNL VIEMAFLIQA NTVEELPELL LGTCRLNYLD 60
61 VSKSVKER
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.606 | N/A | N/A | a.5.2 | UBA-like |
| View | Download | 0.566 | N/A | N/A | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.563 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.546 | N/A | N/A | a.5.2 | UBA-like |
| View | Download | 0.538 | N/A | N/A | a.5.2 | UBA-like |
| View | Download | 0.481 | N/A | N/A | a.5.2 | UBA-like |
| View | Download | 0.468 | N/A | N/A | a.5.2 | UBA-like |
