| Protein: | BPM6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 415 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BPM6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
273.0 | [0..5] | [415..1] |
|
Region A: Residues: [1-169] |
1 11 21 31 41 51
| | | | | |
1 MSKLMTRTSG SSSPNTIPDQ IESPTSSRSV TQTTNGSHQF VIQGYSLAKG IGVGKHIASD 60
61 NFSVGGYQWT IFVYPDGKNP EDNSSYVSVF IVLASECTEV RALFELSLVD QSGKGKHKVH 120
121 SHFNRSLDGG PYTLKYRGSM WGYKRFFRRS LLETSDYLKD DCLKINCTV
|
| Detection Method: |  |
| Confidence: | 18.0 |
| Match: | 2cr2A |
| Description: | Solution structure of N-terminal domain of speckle-type POZ protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.27961770997634 | bayes_pls_golite062009 |
| transcription regulator activity | 1.31204855886285 | bayes_pls_golite062009 |
| nucleic acid binding | 1.07240204386411 | bayes_pls_golite062009 |
| protein binding | 1.02403906930141 | bayes_pls_golite062009 |
| DNA binding | 0.996677220619186 | bayes_pls_golite062009 |
| catalytic activity | 0.00622013180681097 | bayes_pls_golite062009 |
|
Region A: Residues: [170-302] |
1 11 21 31 41 51
| | | | | |
1 GVVVSEMHCP RLLSIHVPDS ELGSHFGKLL DTLQGSDVTF DVAGEKFQAH KLVLAARSQF 60
61 FRSMFYNTLA ENNSDVVISD LEPKVFKALL HFMYKDSLPG DVEPLTAHSF DLLRPSEIDD 120
121 TLIVKLLAAA EMY
|
| Detection Method: | |
| Confidence: | 10.0 |
| Match: | 2ppiA |
| Description: | No description for 2ppiA was found. |
|
Region A: Residues: [303-415] |
1 11 21 31 41 51
| | | | | |
1 NLSRLRLLCE SHICKGISIS SVSKILALSD KYNASELKSV SLKFTAENLA AVLQTKAYED 60
61 LKDDCPNLQS ELLKAVAGYD DTSSSGGGKS QSVWAQLSNG GETSSRRVRQ RTT
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 2eqxA |
| Description: | No description for 2eqxA was found. |
