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View Structure Prediction Details

Protein: FUS3_ARATH
Organism: Arabidopsis thaliana
Length: 313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FUS3_ARATH.

Description E-value Query
Range
Subject
Range
gi|85069279 - gi|85069279|gb|ABC69711.1| auxin response factor 2 [Lycopersicon esculentum]
354.0 [0..6] [308..47]
gi|30027167 - gi|30027167|gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
353.0 [0..7] [308..42]
gi|62319903 - gi|62319903|dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana]
348.0 [0..7] [308..66]
gi|73697834 - gi|73697834|gb|AAZ81521.1| auxin response factor 1 [Gossypium barbadense]
345.0 [0..7] [308..27]
gi|115485689, gi... - gi|115485689|ref|NP_001067988.1| Os11g0523800 [Oryza sativa (japonica cultivar-group)], gi|113645210...
344.0 [0..7] [308..45]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP RQRRSSSSFN  60
   61 LLSFPPPMPP ISHVPT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [77-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLPARKIDPR KLRFLFQKEL KNSDVSSLRR MILPKKAAEA HLPALECKEG IPIRMEDLDG  60
   61 FHVWTFKYRY WPNNNSRMYV LENTGDFVNA HGLQLGDFIM VYQDLYSNNY VIQARKASEE 120
  121 EEVDVIN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.0
Match: 1widA
Description: Solution Structure of the B3 DNA-Binding Domain of RAV1
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [204-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEEDDVYTNL TRIENTVVND LLLQDFNHHN NNNNNNSNSN SNKCSYYYPV IDDVTTNTES  60
   61 FVYDTTALTS NDTPLDFLGG HTTTTNNYYS KFGTFDGLGS VENISLDDFY 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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