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Protein Overview: gi|115485689, gi...

General Information:
Name(s) found: gi|115485689 [NCBI NR]
gi|113645210 [NCBI NR]
gi|108864436 [NCBI NR]
gi|108864434 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|115485689|ref|NP_001067988.1| Os11g0523800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113645210|dbj|BAF28351.1| Os11g0523800 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108864436|gb|ABG22499.1| Auxin response factor 2, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|108864434|gb|ABG22498.1| Auxin response factor 2, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 852 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAEVGGGG GEGDAAAAAV ARGGGGGGGG GGGEDALFTE LWSACAGPLV TVPRVGEKVF  60
   61 YFPQGHIEQV EASTNQVGEQ RMQLYNLPWK ILCEVMNVEL KAEPDTDEVY AQLTLLPESK 120
  121 QQEDNGSTEE EVPSAPAAGH VRPRVHSFCK TLTASDTSTH GGFSVLRRHA DECLPPLDMS 180
  181 RQPPTQELVA KDLHGVEWRF RHIFRGQPRR HLLQSGWSVF VSAKRLVAGD AFIFLRGENG 240
  241 ELRVGVRRAM RQQTNVPSSV ISSHSMHLGV LATAWHAVNT GTMFTVYYKP RTSPAEFVVP 300
  301 YDRYMESLKQ NYSIGMRFKM RFEGEEAPEQ RFTGTIVGMG DSDPAGWPES KWRSLKVRWD 360
  361 EASSIPRPER VSPWQIEPAV SPPPVNPLPV PRTKRLRPNA TALPADSSAI AKEAATKVVV 420
  421 ESEPNGTQRT FQTQENATPK SGFGNSSELE SAQKSIMRPS GFDREKNNTP IQWKLGSDGR 480
  481 MQMSKPESYS EMLSGFQPPK DVQIPQGFCS LPEQITAGHS NFWHTVNAQY QDQQSNHNMF 540
  541 PSSWSFMPPN TRLGLNKQNY SMIQEAGVLS QRPGNTKFGN GVYAALPGRG TEQYSGGWFG 600
  601 HMMPNSHMDD TQPRLIKPKP LVVAHGDVQK AKGASCKLFG IHLDSPAKSE PLKSPSSVVY 660
  661 DGTPQTPGAT EWRRPDVTEV EKCSDPSKAM KPLDTPQPDS VPEKPSSQQA SRNMSCKSQG 720
  721 VSTRSCKKVH KQGIALGRSV DLTKFNGYEE LIAELDDMFD FNGELKGPKK EWMVVYTDNE 780
  781 GDMMLVGDDP WIEFCDMVHK IFIYTREEVQ RMNPGTLNSR SEDSHANSME RGSVGREMRG 840
  841 CLSTSSLNSE NC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] deduced N/A No confident structure predictions are available.
    2 View Details [131..296] PSI-BLAST 32.0 Solution Structure of the B3 DNA-Binding Domain of RAV1
    3 View Details [297..366] deduced N/A No confident structure predictions are available.
    4 View Details [367..518] MSA 1.318992 View MSA. No confident structure predictions are available.
    5 View Details [519..631] deduced N/A No confident structure predictions are available.
    6 View Details [632..852] MSA 6.27198 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle