| Protein: | gi|15229409 |
| Organism: | Arabidopsis thaliana |
| Length: | 1045 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15229409.
| Description | E-value | Query Range |
Subject Range |
|
|
741.0 | [0..1] | [1045..6] |
|
|
653.0 | [0..12] | [1012..17] |
|
|
649.0 | [0..12] | [1010..17] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MADPASCYIY HERDVDQALV VLKKGTQLLK YSRKGKPKFR AFRLSPDEKT LIWFSRGEEK 60
61 GLKLFEVSRI VPGQRTRFLR PEKDHLSFSL LYNNRERSLD LICKDKAETE VWFAALKFLI 120
121 EKSRNRRARS EIPEIHDS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [139-596] |
1 11 21 31 41 51
| | | | | |
1 DTFSVGRQSI DFVPSNIPRG RTSIDLGYQN NSDVGYERGN MLRPSTDGFR ISVSSTPSCS 60
61 SGGSGPDDIE SLGDVYVWGE VWTEGILPDG TASNETVKTD VLTPRPLESN VVLDVHQIVC 120
121 GVRHVALVTR QGEVFTWGEE VGGRLGHGIQ VDISRPKLVE FLALTNIDFV ACGEYHTCVV 180
181 STSGDLFSWG DGIHNVGLLG HGSDISHWIP KRVSGPLEGL QVLSVACGTW HSALATANGK 240
241 LFTFGDGAFG VLGHGNRESV SYPKEVQSLN GLKTVKVACS IWHTAAIVEV MGQTATSMSS 300
301 RKLFTWGDGD KNRLGHGNKE TYLLPTCVSS LIDYNFHKIA CGHTFTVALT TSGHVFTMGG 360
361 TAHGQLGNSI SDGKLPCLVQ DRLVGEFVEE IACGAHHVAV LTSRSEVFTW GKGANGRLGH 420
421 GDTEDKRTPT LVEALRDRHV KSLSCGSNFT SSICIHKW
|
| Detection Method: | |
| Confidence: | 86.522879 |
| Match: | 1a12A |
| Description: | Regulator of chromosome condensation RCC1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [597-722] |
1 11 21 31 41 51
| | | | | |
1 VSGADQSICS GCRQAFGFTR KRHNCYNCGL VHCHACSSKK ALKAALAPTP GKPHRVCDAC 60
61 YSKLKAAESG YSSNVNRNVA TPGRSIDGSV RTDRETTRSS KVLLSANKNS VMSSSRPGFT 120
121 PESSNA
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 2yw8A |
| Description: | No description for 2yw8A was found. |
|
Region A: Residues: [723-799] |
1 11 21 31 41 51
| | | | | |
1 RASQVPSLQQ LKDIAFPSSL SAIQNAFKPV VAPTTTPPRT LVIGPSSPSP PPPPRSSSPY 60
61 ARRPSPPRTS GFSRSVI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [800-1045] |
1 11 21 31 41 51
| | | | | |
1 DSLRKTNEVM NQEMTKLHSQ QRCNNQGTEI ERFQKAAKDA SELAARQSSK HKAATEALKS 60
61 VAEQLKELKE KLPPEVSESE AFESINSQAE AYLNANKVSE TSPLTTSGQE QETYQKTEEQ 120
121 VPSNSSITET SSSSRAPSTE ASSSRISGKE SKEQFEPGVY VTYEVDMNGN KIFRRVRFSK 180
181 KRFDEHQAED WWTKNKDRLL KCYSSNSSSS SSSSNPTASD SPVAPQPPSD PSVPEQSNEK 240
241 EPDSET
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
