| Protein: | gi|115646890, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 517 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115646890, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
379.0 | [0..1] | [432..1] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MAAMARCALI PSINPAHSFR HQFPQPNASF YLPPTLPIFS RVRRFGISGG YRRRVITMAA 60
61 GTDHYSTLNV NRNATLQEIK SSYRKLARKY HPDMNKNPGA EDKFKQISAA YEVLSDEEKR 120
121 SAYDRFGEAG LEGDFNGSQD TSPGVDPFDL YSAFFGGSDG FFGGMGESGG MG
|
| Detection Method: |  |
| Confidence: | 20.30103 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| unfolded protein binding | 3.04403163860617 | bayes_pls_golite062009 |
| protein binding | 2.65982681685488 | bayes_pls_golite062009 |
| binding | 2.63138872417193 | bayes_pls_golite062009 |
| transcription regulator activity | 2.31739509739943 | bayes_pls_golite062009 |
| heat shock protein binding | 2.17994194200939 | bayes_pls_golite062009 |
| DNA binding | 1.88444505115207 | bayes_pls_golite062009 |
| nucleic acid binding | 1.73387701301727 | bayes_pls_golite062009 |
| chaperone binding | 1.61155546076854 | bayes_pls_golite062009 |
| transporter activity | 1.24234020477393 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.927337691912581 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.675735261884317 | bayes_pls_golite062009 |
| Hsp70 protein binding | 0.541755903922701 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.511269247434737 | bayes_pls_golite062009 |
| transferase activity | 0.240656521918556 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.130185025729857 | bayes_pls_golite062009 |
| catalytic activity | 0.106988907594358 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.0276971914937192 | bayes_pls_golite062009 |
|
Region A: Residues: [173-428] |
1 11 21 31 41 51
| | | | | |
1 FDFMNKRSLD LDIRYDLRLS FEEAVFGVKR EIEVSYLETC DGCGGTGAKS SNSIKQCSSC 60
61 DGKGRVMNSQ RTPFGIMSQV STCSKCGGEG KTITDKCRKC IGNGRLRARK KMDVVVPPGV 120
121 SDRATMRIQG EGNMDKRSGR AGDLFIVLQV DEKRGIRREG LNLYSNINID FTDAILGATT 180
181 KVETVEGSMD LRIPPGTQPG DTVKLPRKGV PDTDRPSIRG DHCFVVKISI PKKLSERERK 240
241 LVEEFSSLRR SSSSTG
|
| Detection Method: | |
| Confidence: | 46.0 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.7298921704023 | bayes_pls_golite062009 |
| protein binding | 2.6297172985864 | bayes_pls_golite062009 |
| protein disulfide isomerase activity | 2.4409950647303 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, transposing S-S bonds | 2.4409950647303 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, interconverting keto- and enol-groups | 2.23398279564144 | bayes_pls_golite062009 |
| unfolded protein binding | 2.04158808514315 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.594882036388263 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.301226589648736 | bayes_pls_golite062009 |
| catalytic activity | 0.276917867171685 | bayes_pls_golite062009 |
|
Region A: Residues: [429-517] |
1 11 21 31 41 51
| | | | | |
1 PTETRQEEQS FGSEPRKEPS LWHKMKNFIR PEDSRTKFGT MSLNPSLPLR RMKVSETSIA 60
61 FSVLALCVIT SAVALVQKKG NRLKQKKET
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
