| Protein: | DCUP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 418 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DCUP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
486.0 | [0..57] | [404..4] |
|
Region A: Residues: [1-418] |
1 11 21 31 41 51
| | | | | |
1 MSLSSPTSAC SSSRCYSSGL SFPIGFGSNP INVGLVCYPK RYSIAARKFV VACSSSSSDP 60
61 LLVKAAKGQA ISRPPAWMMR QAGRYMAVYQ KLAKKHPSFR ERSENTDLIV EISLQPWQAF 120
121 RPDGVIIFSD ILTPLPAFGV PFDIEEVKGP VIQSPIRTEE DMKRLHPIDF EKLQFVGDSL 180
181 KILRREVGEH AAVLGFVGAP WTIATYIVEG GTTRTYTVIK NMCHTAPDVL RALLSHLTKA 240
241 ITEYVVYQVE HGAHCIQIFD SWGGQLTPEM WERWSKPYIE EIIHAVKKRC PDTPIVFYIN 300
301 GNGGLLERMK GTGADVIGLD WTVDMADGRR RLGSEVSVQG NVDPAYLFSP LPALTEEIER 360
361 VVKCAGPKGH ILNLGHGVLV GTPEEAVAHF FETARNLDYQ TLFQNHVPAE KAEPELVV
|
| Detection Method: |  |
| Confidence: | 113.0 |
| Match: | 1j93A |
| Description: | Uroporphyrinogen decarboxylase, UROD |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| uroporphyrinogen decarboxylase activity | 4.48282084722609 | bayes_pls_golite062009 |
| catalytic activity | 2.37862248560593 | bayes_pls_golite062009 |
| carboxy-lyase activity | 1.67493268854029 | bayes_pls_golite062009 |
| carbon-carbon lyase activity | 1.54242506764415 | bayes_pls_golite062009 |
| binding | 1.19577203030346 | bayes_pls_golite062009 |
| transferase activity | 1.11861612545715 | bayes_pls_golite062009 |
| protein binding | 0.30230496242508 | bayes_pls_golite062009 |
