| Protein: | gi|63147404, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 562 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|63147404, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
606.0 | [0..25] | [562..1] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MAKLKVAGTW GGILEVELEN WTLNMLRDEV AKRSGLDPES IKLIFAGKIL KDDGDATLTL 60
61 SQLGIKENSK ILSCRQA
|
| Detection Method: |  |
| Confidence: | 13.522879 |
| Match: | 1wjuA |
| Description: | Solution structure of N-terminal ubiquitin-like domain of human NEDD8 ultimate buster-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0934358341245259 | bayes_pls_golite062009 |
| protein binding | 0.03789551947602 | bayes_pls_golite062009 |
|
Region A: Residues: [78-262] |
1 11 21 31 41 51
| | | | | |
1 APEEGKSIMA EEERARRLSR VKAAATALSK RHADGSLPIQ DYNIELEDQG GHKVQFGTET 60
61 DQSAAMMGLM LHTKAKSLIE IEMYSDAVEV LAMAEESFLL CDPKILELVD NLPMMEIDIV 120
121 WCYFLLRDIK CLSDAGVRLV RARKGLERAH GKDLSRVRLL QAGQSPEMAI YLRLELLEGV 180
181 VAYHT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [263-331] |
1 11 21 31 41 51
| | | | | |
1 GQNDKALNAL KSAHAKFLQL QIPDETLSLV MGMGFQEKDA KRALRLNNQD IASSVDFLIE 60
61 ERAKKAQKR
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 2daiA |
| Description: | No description for 2daiA was found. |
|
Region A: Residues: [332-409] |
1 11 21 31 41 51
| | | | | |
1 EQDLQRQSEI LEQKKYGVTP MKKAVDMQML ERLVSIGYAR ELAAESLRRN ENDIQKALDI 60
61 LTDPKVNSTI QAYIESRK
|
| Detection Method: | |
| Confidence: | 9.045757 |
| Match: | 1vekA |
| Description: | Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [410-476] |
1 11 21 31 41 51
| | | | | |
1 RKRQEQLVGI SVAELVSMGF ERGKATSALE AGGSREDTIQ RLLSASVANP GTTTTSVINA 60
61 TSSTNNV
|
| Detection Method: | |
| Confidence: | 14.69897 |
| Match: | 1vegA |
| Description: | Solution Structure of RSGI RUH-012, a UBA Domain from Mouse cDNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [477-562] |
1 11 21 31 41 51
| | | | | |
1 GAESSGFGGG AEQDSEMKDE TTDDIANRAS TSSDGMEEER DSEIEDEIAD EIARVDALSA 60
61 YDINLDKEIE AINEYLAMLD ASQESC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
