| Protein: | gi|124301088, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 413 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|124301088, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
430.0 | [0..52] | [413..1] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MRVLIRPNFL SNLIRYCSRG THSHDRSLRS VLSSNMIRLY TTGMEPQLSP DLIKIMDQRL 60
61 SAIEHR
|
| Detection Method: |  |
| Confidence: | 15.522879 |
| Match: | 1qvrA |
| Description: | Crystal Structure Analysis of ClpB |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [67-413] |
1 11 21 31 41 51
| | | | | |
1 NAVLQKLINQ PEYSPEEFSR ANKELRKLRD SMLLINDLRA KQKEIDGLKS LVSESSDDKD 60
61 MLDLAVGELD EAVEEEKRLQ TLLLKSLLPK DEADERDCIL EVRAGTGGEE ASLFAMDIFR 120
121 MYERYSQKKG WKFDIVDITE SDMKGYKEAS AAICGASVYG KLKFESGIHR VQRIPITEKS 180
181 GRIHTSAISV AILPQADEVD VQLRNEDLRI DTYRSGGSGG QHANTTNSAV RIIHLPTGMM 240
241 VSIQDERSQH MNRAKALKVL CARLYEIERL RIQSSRSKLR SDQIGSGDRS GRIRTYNFPQ 300
301 GRVTDHRVGI THHAIEDMMQ GENLDMFIDA LLLRQEMDAI ASFSSTS
|
| Detection Method: | |
| Confidence: | 114.0 |
| Match: | 2b3tB |
| Description: | Molecular basis for bacterial class 1 release factor methylation by PrmC |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation release factor activity | 8.81340749100602 | bayes_pls_golite062009 |
| translation termination factor activity | 8.79662142368955 | bayes_pls_golite062009 |
| translation regulator activity | 4.37724037539958 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 4.37180094464794 | bayes_pls_golite062009 |
| nucleic acid binding | 3.32397225745616 | bayes_pls_golite062009 |
| binding | 2.93072278766889 | bayes_pls_golite062009 |
